Evidence map›Paper›PMID 31285624›Full record

ArticleNature methods2019

Mechanistic investigation of mEos4b reveals a strategy to reduce track interruptions in sptPALM.

Elke De Zitter, Daniel Thédié, Viola Mönkemöller, Siewert Hugelier, Joël Beaudouin, Virgile Adam, Martin Byrdin, Luc Van Meervelt, Peter Dedecker, Dominique Bourgeois

Abstract read
PubMed Publisher
In one paragraph

Article in Nature methods, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Decoding mEos4b day-long maturation and engineering fast-maturing variants.Protein science : a publication of the Protein Society · 2025
    Article
  7. TheJournal of applied crystallography · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Choosing the Probe for Single-Molecule Fluorescence Microscopy.International journal of molecular sciences · 2022
    Review
  16. Rational Control of Off-State Heterogeneity in a Photoswitchable Fluorescent Protein Provides Switching Contrast Enhancement.Chemphyschem : a European journal of chemical physics and physical chemistry · 2022
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Elke De ZitterDepartment of Chemistry, KU Leuven, Heverlee, Belgium.
Daniel ThédiéUniversity Grenoble Alpes, CEA, CNRS, IBS, Grenoble, France.
Viola MönkemöllerDepartment of Chemistry, KU Leuven, Heverlee, Belgium.
Siewert HugelierDepartment of Chemistry, KU Leuven, Heverlee, Belgium.
Joël BeaudouinUniversity Grenoble Alpes, CEA, CNRS, IBS, Grenoble, France.
Virgile AdamUniversity Grenoble Alpes, CEA, CNRS, IBS, Grenoble, France.ORCID http://orcid.org/0000-0003-2209-7846
Martin ByrdinUniversity Grenoble Alpes, CEA, CNRS, IBS, Grenoble, France.
Luc Van MeerveltDepartment of Chemistry, KU Leuven, Heverlee, Belgium.ORCID http://orcid.org/0000-0003-2186-5209
Peter DedeckerDepartment of Chemistry, KU Leuven, Heverlee, Belgium. peter.dedecker@kuleuven.be.ORCID http://orcid.org/0000-0002-1882-2075
Dominique BourgeoisUniversity Grenoble Alpes, CEA, CNRS, IBS, Grenoble, France. dominique.bourgeois@ibs.fr.ORCID http://orcid.org/0000-0002-1862-7712

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Green-to-red photoconvertible fluorescent proteins repeatedly enter dark states, causing interrupted tracks in single-particle-tracking localization microscopy (sptPALM). We identified a long-lived dark state in photoconverted mEos4b that results from isomerization of the chromophore and efficiently absorbs cyan light. Addition of weak 488-nm light swiftly reverts this dark state to the fluorescent state. This strategy largely eliminates slow blinking and enables the recording of longer tracks in sptPALM with minimum effort.

Indexed as

AnimalsB7-2 AntigenCell TrackingChlorocebus aethiopsCOS CellsCrystallography, X-RayHeLa CellsHumansLuminescent ProteinsMicroscopy, FluorescenceMutationPhotochemical ProcessesProtein ConformationB7-2 AntigenLuminescent Proteins

Identifiers

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.