Evidence map›Paper›PMID 31285484›Full record

ArticleScientific reports2019

Proteomic study of the membrane components of signalling cascades of Botrytis cinerea controlled by phosphorylation.

Almudena Escobar-Niño, Eva Liñeiro, Francisco Amil, Rafael Carrasco, Cristina Chiva, Carlos Fuentes, Barbara Blanco-Ulate, Jesús M Cantoral Fernández, Eduard Sabidó, Francisco Javier Fernández-Acero

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

  1. Proteomics-Based Approaches to Decipher the Molecular Strategies ofJournal of fungi (Basel, Switzerland) · 2025
    Review
  2. Synergistic mechanism and environmental behavior of tank-mix adjuvants to topramezone and atrazine.Environmental science and pollution research international · 2024
    Article
  3. Review
  4. Unravelling the Initial Triggers ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Almudena Escobar-NiñoAndalusian Center for Grape and Grapevine Research (IVAGRO), Microbiology Lab, University of Cadiz, Puerto Real, 11510, Spain.
Eva LiñeiroAndalusian Center for Grape and Grapevine Research (IVAGRO), Microbiology Lab, University of Cadiz, Puerto Real, 11510, Spain.
Francisco AmilBioinformatics Unit, SCAI, University of Córdoba, Ramón y Cajal Building, Rabanales Campus, 14071, Córdoba, Spain.
Rafael CarrascoAndalusian Center for Grape and Grapevine Research (IVAGRO), Microbiology Lab, University of Cadiz, Puerto Real, 11510, Spain.
Cristina ChivaProteomics Unit, Centre for Genomic Regulation (CRG), 08003, Barcelona, Spain.ORCID http://orcid.org/0000-0001-8150-6203
Carlos FuentesProteomics Unit, SCAI, University of Córdoba, Ramón y Cajal Building, Rabanales Campus, 14071, Córdoba, Spain.
Barbara Blanco-UlateDepartment of Plant Sciences, University of California, Davis, CA, 95616, USA.ORCID http://orcid.org/0000-0002-8819-9207
Jesús M Cantoral FernándezAndalusian Center for Grape and Grapevine Research (IVAGRO), Microbiology Lab, University of Cadiz, Puerto Real, 11510, Spain.
Eduard SabidóProteomics Unit, Centre for Genomic Regulation (CRG), 08003, Barcelona, Spain.
Francisco Javier Fernández-AceroAndalusian Center for Grape and Grapevine Research (IVAGRO), Microbiology Lab, University of Cadiz, Puerto Real, 11510, Spain. franciscojavier.fernandez@uca.es.ORCID http://orcid.org/0000-0002-4052-6141
Universidad de Cádiz · ESUniversitat Pompeu Fabra · ESUniversity of Córdoba · ESUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein phosphorylation and membrane proteins play an important role in the infection of plants by phytopathogenic fungi, given their involvement in signal transduction cascades. Botrytis cinerea is a well-studied necrotrophic fungus taken as a model organism in fungal plant pathology, given its broad host range and adverse economic impact. To elucidate relevant events during infection, several proteomics analyses have been performed in B. cinerea, but they cover only 10% of the total proteins predicted in the genome database of this fungus. To increase coverage, we analysed by LC-MS/MS the first-reported overlapped proteome in phytopathogenic fungi, the "phosphomembranome" of B. cinerea, combining the two most important signal transduction subproteomes. Of the 1112 membrane-associated phosphoproteins identified, 64 and 243 were classified as exclusively identified or overexpressed under glucose and deproteinized tomato cell wall conditions, respectively. Seven proteins were found under both conditions, but these presented a specific phosphorylation pattern, so they were considered as exclusively identified or overexpressed proteins. From bioinformatics analysis, those differences in the membrane-associated phosphoproteins composition were associated with various processes, including pyruvate metabolism, unfolded protein response, oxidative stress response, autophagy and cell death. Our results suggest these proteins play a significant role in the B. cinerea pathogenic cycle.

Indexed as

BotrytisCell WallChromatography, LiquidFungal ProteinsPhosphoproteinsPhosphorylationPlant DiseasesProteomeProteomicsSignal TransductionSolanum lycopersicumTandem Mass SpectrometryFungal ProteinsPhosphoproteinsProteome

Identifiers

PMID31285484
PMCPMC6614480
OpenAlexW2959893798

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.