Evidence map›Paper›PMID 31285443›Full record

ArticleScientific reports2019

Nucleic acid sensing activates the innate cytosolic surveillance pathway and promotes parasite survival in visceral leishmaniasis.

Sushmita Das, Ashish Kumar, Abhishek Mandal, Kumar Abhishek, Sudha Verma, Ajay Kumar, Pradeep Das

RetractedOpen access · goldAbstract readRetracted Publication
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Cytosolic Sensors for Pathogenic Viral and Bacterial Nucleic Acids in Fish.International journal of molecular sciences · 2020
    Review
  6. Review
  7. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sushmita DasDepartment of Microbiology, All-India Institute of Medical Sciences (AIIMS), Patna, India. sushmita.de2008@gmail.com.
Ashish KumarDepartment of Biochemistry, ICMR-Rajendra Memorial Research Institute of Medical Sciences, Patna, India.
Abhishek MandalDepartment of Molecular biology, ICMR-Rajendra Memorial Research Institute of Medical Sciences, Patna, India.
Kumar AbhishekDepartment of Molecular biology, ICMR-Rajendra Memorial Research Institute of Medical Sciences, Patna, India.
Sudha VermaDepartment of Molecular biology, ICMR-Rajendra Memorial Research Institute of Medical Sciences, Patna, India.
Ajay KumarDepartment of Molecular biology, ICMR-Rajendra Memorial Research Institute of Medical Sciences, Patna, India.
Pradeep DasDepartment of Molecular biology, ICMR-Rajendra Memorial Research Institute of Medical Sciences, Patna, India.
Rajendra Memorial Research Institute of Medical Sciences · INAll India Institute of Medical Sciences · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial pattern recognition critically contributes to innate response, both at extracellular and intracellular cytosolic surveillance pathway (CSP) interface. However, the role of pattern recognition by host innate receptors in CSP is poorly understood in Leishmania donovani infection. Here, we have demonstrated that cytosolic targeting of L.donovani DNA (Ld-DNA) inhibits macrophage responsiveness to IFNɣ, through decreased MHC-II expression and lowered pSTAT1 (Y701) levels, involving host three-prime repair exonuclease-1 (TREX-1). The Ld-DNA potently induced type-1 IFNs, i.e. significant over-production of IFNβ through activation of the IRF pathway. Interestingly, knockdown of TRIF or MyD88 expression in macrophages had no effect on cytosolic Ld-DNA transfection-mediated IFN-β production, indicating involvement of a TLR independent pathway. Contrastingly, Ld-DNA failed to induce IFNβ in both TBK-1 and IRF3KO knockout macrophages. Although IFNβ was not induced by Ld-DNA in STING- knockout macrophages, STING alone was not enough for the induction. Evidently, besides STING, Ld-DNA recognition for induction of IFNβ critically required cytosolic cyclic GMP-AMP synthase (cGAS). Furthermore, the cGAS dependent targeting of Ld-DNA induced IFNβ over-production that contributed to antimony resistance in L.donovani infection. We provide the first evidence that enhanced cytosolic sensing of Ld-DNA in infection by antimony resistant (SBR-LD), but not antimony sensitive L.donovani strains (SBS-LD), was critically regulated by host MDRs, multi drug resistant associated protein 1 (MRP 1) and permeability glycoprotein (P-gp) in macrophages. Collectively, our results disclose Ld-DNA as a vital pathogen associated molecular pattern (PAMP) driving host Type-I IFN responses and antimony resistance. The findings may help in future development of policies for novel anti-leishmanial therapeutics.

Indexed as

AnimalsCytosolDNA, ProtozoanHEK293 CellsHumansImmunity, InnateInterferon-gammaLeishmania donovaniLeishmaniasis, VisceralMembrane ProteinsMiceRAW 264.7 CellsSTING ProteinTHP-1 CellsDNA, ProtozoanIFNG protein, humanInterferon-gammaMembrane ProteinsSTING1 protein, humanSTING Protein

Identifiers

PMID31285443
PMCPMC6614394
OpenAlexW2954122086

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.