ArticleProceedings of the National Academy of Sciences of the United States of America2019
Global-level population genomics reveals differential effects of geography and phylogeny on horizontal gene transfer in soil bacteria.
Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.
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Who cites it
53 citing papers in PubMed.
- Efficacy of a novel bacteriophage in controlling Escherichia coli associated with swine farm environments and its potential for biofilm disruption.Scientific reports · 2026Article
- Causes and consequences of bacterial local adaptation via MGEs in the plant microbiome.The New phytologist · 2026Review
- A Novel Bioinformatics Pipeline and a Machine-Learning Approach for Antimicrobial Resistance Phenotypic Prediction.Bioinformatics and biology insights · 2026Article
- Effects of Legume‒Cereal Rotation on Sorghum Rhizosphere Microbial Community Structure and Nitrogen-Cycling Functions.MicrobiologyOpen · 2025Article
- Symbiotic Effectiveness, Rhizosphere Competence and Nodule Occupancy of Chickpea Root Nodule Bacteria from Soils in Kununurra Western Australia and Narrabri New South Wales Australia.Plants (Basel, Switzerland) · 2025Article
- Closed genomes of commercial inoculant rhizobia provide a blueprint for management of legume inoculation.Applied and environmental microbiology · 2025Article
- Mesorhizobium salmacidum sp. nov. and Mesorhizobium argentiipisi sp. nov. are symbionts of the dry-land forage legumes Lessertia diffusa and Calobota sericea.Antonie van Leeuwenhoek · 2025Review
- Genome-wide association studies identified novel SNPs associated with efficient biological nitrogen fixation in chickpea (Frontiers in plant science · 2025Article
- Genotypic variation in resource exchange, use, and production traits in the legume-rhizobia mutualism.Ecology and evolution · 2024Article
- Synthetic microbiology in sustainability applications.Nature reviews. Microbiology · 2024Review
- The evolutionary genomics of adaptation to stress in wild rhizobium bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2024Article
- Modeling the mosaic structure of bacterial genomes to infer their evolutionary history.Proceedings of the National Academy of Sciences of the United States of America · 2024Article
- Comparative Genome Analysis of PolarMicroorganisms · 2024Article
- Impacts of Natural Selection on Evolution of Core and Symbiotically Specialized (International journal of molecular sciences · 2023Article
- Mosaic environment-driven evolution of the deep-sea mussel Gigantidas platifrons bacterial endosymbiont.Microbiome · 2023Article
- Global within-species phylogenetics of sewage microbes suggest that local adaptation shapes geographical bacterial clustering.Communications biology · 2023Article
- Hiding in plain sight: Genome-wide recombination and a dynamic accessory genome drive diversity inProceedings of the National Academy of Sciences of the United States of America · 2023Article
- Expression of macromolecular organic nitrogen degrading enzymes identifies potential mediators of soil organic N availability to an annual grass.The ISME journal · 2023Article
- Article
- A New Perspective for Vineyard Terroir Identity: Looking for Microbial Indicator Species by Long Read Nanopore Sequencing.Microorganisms · 2023Article
Corrections and comments
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Authors and funding
26 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Although microorganisms are known to dominate Earth's biospheres and drive biogeochemical cycling, little is known about the geographic distributions of microbial populations or the environmental factors that pattern those distributions. We used a global-level hierarchical sampling scheme to comprehensively characterize the evolutionary relationships and distributional limitations of the nitrogen-fixing bacterial symbionts of the crop chickpea, generating 1,027 draft whole-genome sequences at the level of bacterial populations, including 14 high-quality PacBio genomes from a phylogenetically representative subset. We find that diverse
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