Evidence map›Paper›PMID 31284557›Full record

ArticleSensors (Basel, Switzerland)2019

Red Fluorescent Genetically Encoded Voltage Indicators with Millisecond Responsiveness.

Liubov A Kost, Violetta O Ivanova, Pavel M Balaban, Konstantin A Lukyanov, Evgeny S Nikitin, Alexey M Bogdanov

Abstract read
In one paragraph

Article in Sensors (Basel, Switzerland), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Liubov A KostShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow 117997, Russia.
Violetta O IvanovaInstitute of Higher Nervous Activity and Neurophysiology, Moscow 117485, Russia.
Pavel M BalabanInstitute of Higher Nervous Activity and Neurophysiology, Moscow 117485, Russia.ORCID 0000-0001-9248-8207
Konstantin A LukyanovCenter of Life Sciences, Skolkovo Institute of Science and Technology, Moscow 121205, Russia.ORCID 0000-0001-9845-2088
Evgeny S NikitinInstitute of Higher Nervous Activity and Neurophysiology, Moscow 117485, Russia.ORCID 0000-0003-0149-2054
Alexey M BogdanovShemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow 117997, Russia. noobissat@ya.ru.ORCID 0000-0002-5346-789X

Funding

Russian Foundation for Basic Research 17-00-00216Russian Foundation for Basic Research 18-34-20087Russian Foundation for Basic Research 19-015-00022
6 · The paper itself

Abstract

Genetically encoded fluorescent indicators typically consist of the sensitive and reporter protein domains connected with the amino acid linkers. The final performance of a particular indicator may depend on the linker length and composition as strong as it depends on the both domains nature. Here we aimed to optimize interdomain linkers in VSD-FR189-188-a recently described red fluorescent protein-based voltage indicator. We have tested 13 shortened linker versions and monitored the dynamic range, response speed and polarity of the corresponding voltage indicator variants. While the new indicators didn't show a contrast enhancement, some of them carrying very short interdomain linkers responded 25-fold faster than the parental VSD-FR189-188. Also we found the critical linker length at which fluorescence response to voltage shift changes its polarity from negative to positive slope. Our observations thus make an important contribution to the designing principles of the fluorescent protein-derived voltage indicators.

Indexed as

Biosensing TechniquesElectrophysiologyHEK293 CellsHumansLuminescent ProteinsMembrane PotentialsMicroscopy, FluorescencePatch-Clamp TechniquesProtein EngineeringRecombinant Fusion ProteinsRed Fluorescent ProteinStructure-Activity RelationshipLuminescent ProteinsRecombinant Fusion ProteinsRed Fluorescent Proteinbiosensing techniqueselectrophysiologygenetically encoded voltage indicatorsinterdomain linkersmembrane voltagered fluorescent proteinsvoltage sensors

Identifiers

PMID31284557
PMCPMC6651345

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.