Evidence map›Paper›PMID 31283593›Full record

ArticleDiseases of the colon and rectum2019

Identification of Collagenolytic Bacteria in Human Samples: Screening Methods and Clinical Implications for Resolving and Preventing Anastomotic Leaks and Wound Complications.

Kristina L Guyton, Zoe C Levine, Ann C Lowry, Laura Lambert, Irena Gribovskaja-Rupp, Neil Hyman, Olga Zaborina, John Alverdy

Open access · greenAbstract readCase Reports
In one paragraph

Article in Diseases of the colon and rectum, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
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  13. Involvement of the Commensal OrganismSurgical infections · 2020
    Article
  14. Infliximab Does Not Promote the Presence of Collagenolytic Bacteria in a Mouse Model of Colorectal Anastomosis.Journal of gastrointestinal surgery : official journal of the Society for Surgery of the Alimentary Tract · 2020
    Article
  15. Article
  16. Bowel preparation under siege.The British journal of surgery · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Kristina L GuytonDepartment of Surgery, University of Chicago, Chicago, Illinois.
Zoe C LevineDepartment of Surgery, University of Chicago, Chicago, Illinois.
Ann C LowryColon and Rectal Surgery Associates, University of Minnesota, Minneapolis, Minnesota.
Laura LambertSection of Surgical Oncology, Huntsman Cancer Institute, University of Utah, Salt Lake City, Utah.
Irena Gribovskaja-RuppUniversity of Iowa Hospitals and Clinics, Iowa City, Iowa.
Neil HymanDepartment of Surgery, University of Chicago, Chicago, Illinois.
Olga ZaborinaDepartment of Surgery, University of Chicago, Chicago, Illinois.
John AlverdyDepartment of Surgery, University of Chicago, Chicago, Illinois.
University of Chicago · USColon and Rectal Surgery Associates · USHuntsman Cancer Institute · USUniversity of Iowa Hospitals and Clinics · US

Funding

ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI LIU, CAMBRIAN YANGSHAO · 1990 to 2025
$29.8M
PSEUDOMONAS'EFFECTS ON THE GUT BARRIER FROM SURGERYR01GM062344 · NIGMS · UNIVERSITY OF CHICAGO · PI ALVERDY, JOHN C · 2001 to 2025
$9.2M
Serial Endoscopic Surveillance (SES) and Direct Topical Antibiotics (DTA) to prevR34GM111550 · NIGMS · UNIVERSITY OF CHICAGO · PI ALVERDY, JOHN C · 2014 to 2014
$158k
NIDDK NIH HHS P30 DK042086NIGMS NIH HHS R01 GM062344NIGMS NIH HHS R34 GM111550
6 · The paper itself

Abstract

backgroundBacteria that produce collagen-digesting enzymes (collagenolytic bacteria) have been shown to play a critical and previously unappreciated role in anastomotic leak pathogenesis by breaking down host tissue extracellular matrix proteins. Detection of these bacteria is labor intensive, and no screening method currently exists.

objectivesWe evaluated a rapid screening method developed to detect the presence of these collagenolytic bacteria in clinical samples, such as drain fluid, anastomotic tissue, or feces.

designWe compared a new method of detecting collagenolytic bacterial species with a previously used technique using samples from a murine experimental model and then demonstrated the utility of this screening method in samples from patients with anastomotic complications. SETTINGS: All of the laboratory work and previous murine experiments were performed in Dr Alverdy's laboratory at the University of Chicago under institutional review board-approved protocols. PATIENTS: Samples from patients with challenging wound complications were provided by participating clinicians with verbal patient consent. Given the small number of patients, this was determined to be institutional review board exempt.

main outcome measuresWhether this analysis can influence patient management and outcomes will require additional study.

resultsThis screening method detects numerous strains of bacteria with collagenolytic properties, including the collagenolytic species that have been implicated previously in anastomotic leak. Once collagenolytic strains are identified, they can be speciated and tested for antibiotic resistance using standard laboratory techniques. LIMITATIONS: This study is limited by the small number of patient samples tested.

conclusionsWe demonstrated the potential applicability of this assay to evaluate rare and complex anastomotic complications that often require analysis beyond standard culture and sensitivity assays. Future applications of this method may allow the development of strategies to prevent anastomotic leak related to collagenolytic bacteria. See Video Abstract at http://links.lww.com/DCR/A962.

Indexed as

Anastomotic LeakAntibiotic ProphylaxisBacteriaColectomyCollagenasesColonic DiseasesFemaleHumansMaleRecurrenceRetrospective StudiesSurgical Wound InfectionCollagenases

Identifiers

PMID31283593
PMCPMC6624086
OpenAlexW2959002281

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.