Evidence map›Paper›PMID 31283468›Full record

ArticleeLife2019

Identification of RBPMS as a mammalian smooth muscle master splicing regulator via proximity of its gene with super-enhancers.

Erick E Nakagaki-Silva, Clare Gooding, Miriam Llorian, Aishwarya G Jacob, Frederick Richards, Adrian Buckroyd, Sanjay Sinha, Christopher W J Smith

Open access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. MBNL loss of function in smooth muscle as a model for myotonic dystrophy associated gastrointestinal dysmotility.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Spatial Transcriptomics RevealsbioRxiv : the preprint server for biology · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. The RNA-binding protein RBPMS inhibits smooth muscle cell-driven vascular remodeling in atherosclerosis and vascular injury.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  12. Article
  13. Differentiation and Growth-Arrest-Related lncRNA (International journal of molecular sciences · 2024
    Article
  14. Article
  15. Article
  16. RNA binding proteins in cardiovascular development and disease.Current topics in developmental biology · 2024
    Article
  17. Review
  18. The RBPMSiScience · 2023
    Article
  19. Article
  20. InducibleCells · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 2 countries.

Erick E Nakagaki-SilvaDepartment of Biochemistry, University of Cambridge, Cambridge, United Kingdom.ORCID https://orcid.org/0000-0002-6878-4409
Clare GoodingDepartment of Biochemistry, University of Cambridge, Cambridge, United Kingdom.
Miriam LlorianDepartment of Biochemistry, University of Cambridge, Cambridge, United Kingdom.
Aishwarya G JacobDepartment of Biochemistry, University of Cambridge, Cambridge, United Kingdom.
Frederick RichardsDepartment of Biochemistry, University of Cambridge, Cambridge, United Kingdom.
Adrian BuckroydDepartment of Biochemistry, University of Cambridge, Cambridge, United Kingdom.
Sanjay SinhaDepartment of Biochemistry, University of Cambridge, Cambridge, United Kingdom.
Christopher W J SmithDepartment of Biochemistry, University of Cambridge, Cambridge, United Kingdom.ORCID https://orcid.org/0000-0002-2753-3398
University of Cambridge · GB

Funding

British Heart Foundation FS/11/85/29129British Heart Foundation FS/18/46/33663British Heart Foundation PG/16/28/32123Conselho Nacional de Desenvolvimento Científico e Tecnológico 206813/2014-7Medical Research Council MC_PC_12009Wellcome 092900/Z/10/ZWellcome 209368/Z/17/ZWellcome Trust 209368/Z/17/Z
6 · The paper itself

Abstract

Alternative splicing (AS) programs are primarily controlled by regulatory RNA-binding proteins (RBPs). It has been proposed that a small number of master splicing regulators might control cell-specific splicing networks and that these RBPs could be identified by proximity of their genes to transcriptional super-enhancers. Using this approach we identified RBPMS as a critical splicing regulator in differentiated vascular smooth muscle cells (SMCs). RBPMS is highly down-regulated during phenotypic switching of SMCs from a contractile to a motile and proliferative phenotype and is responsible for 20% of the AS changes during this transition. RBPMS directly regulates AS of numerous components of the actin cytoskeleton and focal adhesion machineries whose activity is critical for SMC function in both phenotypes. RBPMS also regulates splicing of other splicing, post-transcriptional and transcription regulators including the key SMC transcription factor Myocardin, thereby matching many of the criteria of a master regulator of AS in SMCs.

Indexed as

RNA SplicingAnimalsCell LineEnhancer Elements, GeneticGene Expression ProfilingGene Expression RegulationHEK293 CellsHumansMuscle, Smooth, VascularMyocardinMyocytes, Smooth MuscleNuclear ProteinsRatsRNA-Binding ProteinsRNA InterferenceTrans-ActivatorsMyocardinNuclear ProteinsRBPMS protein, humanRNA-Binding ProteinsTrans-Activatorsalternative splicingchromosomesgene expressionratRNA binding proteinsmooth musclesuper-enhancer

Identifiers

PMID31283468
PMCPMC6613909
OpenAlexW2962208731

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.