Evidence map›Paper›PMID 31279627›Full record

ArticleStructure (London, England : 1993)2019

Structural Basis for Recruitment of DAPK1 to the KLHL20 E3 Ligase.

Zhuoyao Chen, Sarah Picaud, Panagis Filippakopoulos, Vincenzo D'Angiolella, Alex N Bullock

Open access · hybridAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 36 citations in OpenAlex.

  1. De Novo-Designed Bifunctional Proteins for Targeted Protein Degradation.Journal of the American Chemical Society · 2026
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  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. E3 Ligase Ligands for PROTACs: How They Were Found and How to Discover New Ones.SLAS discovery : advancing life sciences R & D · 2021
    Review
  18. Review
  19. Article
  20. PROTACs- a game-changing technology.Expert opinion on drug discovery · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Zhuoyao ChenStructural Genomics Consortium, University of Oxford, Old Road Campus, Roosevelt Drive, Oxford OX3 7DQ, UK.
Sarah PicaudStructural Genomics Consortium, University of Oxford, Old Road Campus, Roosevelt Drive, Oxford OX3 7DQ, UK.
Panagis FilippakopoulosStructural Genomics Consortium, University of Oxford, Old Road Campus, Roosevelt Drive, Oxford OX3 7DQ, UK.
Vincenzo D'AngiolellaDepartment of Oncology, Cancer Research UK and Medical Research Council Institute for Radiation Oncology, University of Oxford, Oxford OX3 7DQ, UK.
Alex N BullockStructural Genomics Consortium, University of Oxford, Old Road Campus, Roosevelt Drive, Oxford OX3 7DQ, UK. Electronic address: alex.bullock@sgc.ox.ac.uk.
University of Oxford · GBCancer Research UK · GB

Funding

Cancer Research UK C5255/A18085Medical Research Council MC_UU_00001/7Medical Research Council MR/N010051/1Wellcome TrustWellcome Trust 106169/ZZ14/Z
6 · The paper itself

Abstract

BTB-Kelch proteins form the largest subfamily of Cullin-RING E3 ligases, yet their substrate complexes are mapped and structurally characterized only for KEAP1 and KLHL3. KLHL20 is a related CUL3-dependent ubiquitin ligase linked to autophagy, cancer, and Alzheimer's disease that promotes the ubiquitination and degradation of substrates including DAPK1, PML, and ULK1. We identified an "LPDLV"-containing motif in the DAPK1 death domain that determines its recruitment and degradation by KLHL20. A 1.1-Å crystal structure of a KLHL20 Kelch domain-DAPK1 peptide complex reveals DAPK1 binding as a loose helical turn that inserts deeply into the central pocket of the Kelch domain to contact all six blades of the β propeller. Here, KLHL20 forms salt-bridge and hydrophobic interactions including tryptophan and cysteine residues ideally positioned for covalent inhibitor development. The structure highlights the diverse binding modes of β-propeller domains versus linear grooves and suggests a new target for structure-based drug design.

Indexed as

Adaptor Proteins, Signal TransducingBinding SitesCrystallography, X-RayDeath-Associated Protein KinasesFemaleHEK293 CellsHumansHydrophobic and Hydrophilic InteractionsModels, MolecularProtein BindingProtein DomainsProtein Structure, SecondaryProteolysisUbiquitinationAdaptor Proteins, Signal TransducingDAPK1 protein, humanDeath-Associated Protein KinasesKLHL20 protein, humanautophagyBTBcancercrystallographyCUL3Cullin-RING ligaseprotein-protein interactionubiquitination

Identifiers

PMID31279627
PMCPMC6720452
OpenAlexW2954075939

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.