Evidence map›Paper›PMID 31279229›Full record

ArticleMolecular therapy. Nucleic acids2019

In Vivo Outcome of Homology-Directed Repair at the HBB Gene in HSC Using Alternative Donor Template Delivery Methods.

Sowmya Pattabhi, Samantha N Lotti, Mason P Berger, Swati Singh, Christopher T Lux, Kyle Jacoby, Calvin Lee, Olivier Negre, Andrew M Scharenberg, David J Rawlings

Open access · goldAbstract read
In one paragraph

Article in Molecular therapy. Nucleic acids, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed, 1 pooled it
10.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 1 synthesis or guideline pooled it, 94 citations in OpenAlex.

  1. Pooled it
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  16. TALEN-mediated intron editing of HSPCs enables transgene expression restricted to the myeloid lineage.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
  17. CRISPR-Cas9n-mediated ELANE promoter editing for gene therapy of severe congenital neutropenia.Molecular therapy : the journal of the American Society of Gene Therapy · 2024
    Article
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4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Sowmya PattabhiCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, WA, USA.
Samantha N LottiCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, WA, USA.
Mason P BergerCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, WA, USA.
Swati SinghCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, WA, USA.
Christopher T LuxCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, WA, USA.
Kyle JacobyCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, WA, USA.
Calvin Leebluebird bio, Inc., Cambridge, MA, USA.
Olivier Negrebluebird bio, Inc., Cambridge, MA, USA.
Andrew M ScharenbergCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, WA, USA; Casebia Therapeutics, Cambridge, MA, USA; Department of Pediatrics, University of Washington, School of Medicine, Seattle, WA, USA; Department of Immunology, University of Washington, School of Medicine, Seattle, WA, USA.
David J RawlingsCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, Seattle, WA, USA; Department of Pediatrics, University of Washington, School of Medicine, Seattle, WA, USA; Department of Immunology, University of Washington, School of Medicine, Seattle, WA, USA. Electronic address: drawling@uw.edu.
Bluebird Bio (United States) · USUniversity of Washington · US

Funding

Novel Gene Editing Approaches for HemoglobinopathiesR01HL136135 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HANS-PETER KIEM · 2017 to 2026
$7.7M
NHLBI NIH HHS R01 HL136135
6 · The paper itself

Abstract

Gene editing following designer nuclease cleavage in the presence of a DNA donor template can revert mutations in disease-causing genes. For optimal benefit, reversion of the point mutation in HBB leading to sickle cell disease (SCD) would permit precise homology-directed repair (HDR) while concurrently limiting on-target non-homologous end joining (NHEJ)-based HBB disruption. In this study, we directly compared the relative efficiency of co-delivery of a novel CRISPR/Cas9 ribonucleoprotein targeting HBB in association with recombinant adeno-associated virus 6 (rAAV6) versus single-stranded oligodeoxynucleotides (ssODNs) to introduce the sickle mutation (GTC or GTG; encoding E6V) or a silent change (GAA; encoding E6optE) in human CD34

Indexed as

CD34Crispr/Cas9gene editinghematopoietic stem cellshemoglobin disordershomology-directed repairin vivo engraftmentNBSGW41 miceNHEJ versus HDRrAAV6sickle cell diseasessODNstem cell cures

Identifiers

PMID31279229
PMCPMC6611979
OpenAlexW2953450449

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.