Evidence map›Paper›PMID 31278864›Full record

ArticleChemical senses2019

The Effect of Calcium Buffering and Calcium Sensor Type on the Sensitivity of an Array-Based Bitter Receptor Screening Assay.

Margriet Roelse, Ron Wehrens, Maurice Gl Henquet, Renger F Witkamp, Robert D Hall, Maarten A Jongsma

Open access · hybridAbstract read
In one paragraph

Article in Chemical senses, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Margriet RoelseBU Bioscience, Wageningen University and Research, Droevendaalsesteeg, PB Wageningen, The Netherlands.
Ron WehrensBU Bioscience, Wageningen University and Research, Droevendaalsesteeg, PB Wageningen, The Netherlands.
Maurice Gl HenquetBU Bioscience, Wageningen University and Research, Droevendaalsesteeg, PB Wageningen, The Netherlands.
Renger F WitkampNutritional Biology and Health, Wageningen University and Research, Stippeneng, WE Wageningen, The Netherlandsand.
Robert D HallBU Bioscience, Wageningen University and Research, Droevendaalsesteeg, PB Wageningen, The Netherlands.
Maarten A JongsmaBU Bioscience, Wageningen University and Research, Droevendaalsesteeg, PB Wageningen, The Netherlands.
Wageningen University & Research · NLZimmer Biomet (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetically encoded calcium sensor protein Cameleon YC3.6 has previously been applied for functional G protein-coupled receptor screening using receptor cell arrays. However, different types of sensors are available, with a wide range in [Ca2+] sensitivity, Hill coefficients, calcium binding domains, and fluorophores, which could potentially improve the performance of the assay. Here, we compared the responses of 3 structurally different calcium sensor proteins (Cameleon YC3.6, Nano140, and Twitch2B) simultaneously, on a single chip, at different cytosolic expression levels and in combination with 2 different bitter receptors, TAS2R8 and TAS2R14. Sensor concentrations were modified by varying the amount of calcium sensor DNA that was printed on the DNA arrays prior to reverse transfection. We found that ~2-fold lower concentrations of calcium sensor protein, by transfecting 4 times less sensor-coding DNA, resulted in more sensitive bitter responses. The best results were obtained with Twitch2B, where, relative to YC3.6 at the default DNA concentration, a 4-fold lower DNA concentration increased sensitivity 60-fold and signal strength 5- to 10-fold. Next, we compared the performance of YC3.6 and Twitch2B against an array with 11 different bitter taste receptors. We observed a 2- to 8-fold increase in sensitivity using Twitch2B compared with YC3.6. The bitter receptor arrays contained 300 spots and could be exposed to a series of 18 injections within 1 h resulting in 5400 measurements. These optimized sensor conditions provide a basis for enhancing receptomics calcium assays for receptors with poor Ca2+ signaling and will benefit future high-throughput receptomics experiments.

Indexed as

CalciumCalcium SignalingHEK293 CellsHumansOligonucleotide Array Sequence AnalysisReceptors, Calcium-SensingReceptors, Cell SurfaceReceptors, G-Protein-CoupledSequence Analysis, DNATaste Receptors, Type 2CalciumReceptors, Calcium-SensingReceptors, Cell SurfaceReceptors, G-Protein-CoupledTAS2R8 protein, humanTaste Receptors, Type 2calciumcell arrayGPCRHTS screeningTAS2R

Identifiers

PMID31278864
PMCPMC7357244
OpenAlexW2955019385

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.