Evidence map›Paper›PMID 31277458›Full record

ArticleInternational journal of molecular sciences2019

The TAFs of TFIID Bind and Rearrange the Topology of the TATA-Less

Sarah N Le, Christopher R Brown, Stacy Harvey, Hinrich Boeger, Hans Elmlund, Dominika Elmlund

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Eukaryotic Ribosomal Protein S5 of the 40S Subunit: Structure and Function.International journal of molecular sciences · 2023
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Sarah N LeDepartment of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia.
Christopher R BrownDepartment of Molecular, Cell and Developmental Biology, University of California, Santa Cruz, CA 95064, USA.
Stacy HarveyDepartment of Molecular, Cell and Developmental Biology, University of California, Santa Cruz, CA 95064, USA.
Hinrich BoegerDepartment of Molecular, Cell and Developmental Biology, University of California, Santa Cruz, CA 95064, USA.
Hans ElmlundDepartment of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia. hans.elmlund@monash.edu.
Dominika ElmlundDepartment of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton, VIC 3800, Australia. dominika.elmlund@monash.edu.ORCID 0000-0002-1910-8017
Australian Regenerative Medicine Institute · AUUniversity of California, Santa Cruz · USAlnylam Pharmaceuticals (United States) · US

Funding

Australian Research Council DP170101850
6 · The paper itself

Abstract

The general transcription factor TFIID is a core promoter selectivity factor that recognizes DNA sequence elements and nucleates the assembly of a pre-initiation complex (PIC). The mechanism by which TFIID recognizes the promoter is poorly understood. The TATA-box binding protein (TBP) is a subunit of the multi-protein TFIID complex believed to be key in this process. We reconstituted transcription from highly purified components on a ribosomal protein gene (

Indexed as

Promoter Regions, GeneticDNAGene RearrangementGenes, EssentialImaging, Three-DimensionalProtein BindingRibosomal ProteinsTATA-Binding Protein Associated FactorsTATA BoxTranscription Factor TFIIDTranscription, GeneticDNARibosomal Proteinsribosomal protein S5TATA-Binding Protein Associated FactorsTranscription Factor TFIIDDNA topologyhousekeeping gene transcriptionribosomal protein 5TAF complexTBP-associated factor

Identifiers

PMID31277458
PMCPMC6650902
OpenAlexW2954288276

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.