Evidence map›Paper›PMID 31276611›Full record

ArticleAngewandte Chemie (International ed. in English)2019

Halogen Bonding Increases the Potency and Isozyme Selectivity of Protein Arginine Deiminase 1 Inhibitors.

Santanu Mondal, Xuefeng Gong, Xiaoqian Zhang, Ari J Salinger, Li Zheng, Sudeshna Sen, Eranthie Weerapana, Xuesen Zhang, Paul R Thompson

Abstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Protein citrullination: inhibition, identification and insertion.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Review
  3. Development of LB244, an Irreversible STING Antagonist.Journal of the American Chemical Society · 2023
    Article
  4. Targeting STING oligomerization with small-molecule inhibitors.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Santanu MondalDepartment of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, 364 Plantation street, Worcester, MA, 01605, USA.
Xuefeng GongState Key Laboratory of Reproductive Medicine, Nanjing Medical University, Nanjing, 211166, China.
Xiaoqian ZhangState Key Laboratory of Reproductive Medicine, Nanjing Medical University, Nanjing, 211166, China.
Ari J SalingerDepartment of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, 364 Plantation street, Worcester, MA, 01605, USA.
Li ZhengDepartment of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, 364 Plantation street, Worcester, MA, 01605, USA.
Sudeshna SenDepartment of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, 364 Plantation street, Worcester, MA, 01605, USA.
Eranthie WeerapanaDepartment of Chemistry, Boston College, Chestnut Hill, MA, 02467, USA.
Xuesen ZhangState Key Laboratory of Reproductive Medicine, Nanjing Medical University, Nanjing, 211166, China.
Paul R ThompsonDepartment of Biochemistry and Molecular Pharmacology, University of Massachusetts Medical School, 364 Plantation street, Worcester, MA, 01605, USA.ORCID 0000-0002-1621-3372

Funding

Chemical probes to decipher PAD biologyR35GM118112 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI Paul R Thompson · 2016 to 2026
$9.5M
Exploration of the cellular citrullome using novel mass spectrometry toolsF32GM128231 · NIGMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI SALINGER, ARI · 2018 to 2020
$132k
NIGMS NIH HHS F32 GM128231NIGMS NIH HHS R35 GM118112
6 · The paper itself

Abstract

Protein arginine deiminases (PADs) hydrolyze the side chain of arginine to form citrulline. Aberrant PAD activity is associated with rheumatoid arthritis, multiple sclerosis, lupus, and certain cancers. These pathologies established the PADs as therapeutic targets and multiple PAD inhibitors are known. Herein, we describe the first highly potent PAD1-selective inhibitors (1 and 19). Detailed structure-activity relationships indicate that their potency and selectivity is due to the formation of a halogen bond with PAD1. Importantly, these inhibitors inhibit histone H3 citrullination in HEK293TPAD1 cells and mouse zygotes with excellent potency. Based on this scaffold, we also developed a PAD1-selective activity-based probe that shows remarkable cellular efficacy and proteome selectivity. Based on their potency and selectivity we expect that 1 and 19 will be widely used chemical tools to understand PAD1 biology.

Indexed as

AnimalsCitrullinationCitrullineEmbryo, MammalianEnzyme InhibitorsHEK293 CellsHistonesHumansIsoenzymesMiceProtein-Arginine Deiminase Type 1Protein Processing, Post-TranslationalCitrullineEnzyme InhibitorsHistonesIsoenzymesProtein-Arginine Deiminase Type 1activity-based protein profiling (ABPP)covalent protein modificationhalogen bondinghistone citrullinationprotein arginine deiminase (PAD)

Identifiers

PMID31276611
PMCPMC6713606

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.