Evidence map›Paper›PMID 31275767›Full record

ArticleComputer methods in biomechanics and biomedical engineering. Imaging & visualization2019

Automatic segmentation of the thumb trapeziometacarpal joint using parametric statistical shape modelling and random forest regression voting.

Marco T Y Schneider, Ju Zhang, Joseph J Crisco, Arnold-Peter C Weiss, Amy L Ladd, Poul M F Nielsen, Thor Besier

Abstract read
In one paragraph

Article in Computer methods in biomechanics and biomedical engineering. Imaging & visualization, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Marco T Y SchneiderAuckland Bioengineering Institute, The University of Auckland, Auckland, New Zealand.
Ju ZhangAuckland Bioengineering Institute, The University of Auckland, Auckland, New Zealand.
Joseph J CriscoDepartment of Orthopedics, Warren Alpert Medical School of Brown University, Rhode Island Hospital, RI, USA.
Arnold-Peter C WeissDepartment of Orthopedics, Warren Alpert Medical School of Brown University, Rhode Island Hospital, RI, USA.
Amy L LaddDepartment of Orthopedic Surgery, Stanford, Stanford University, CA, USA.
Poul M F NielsenAuckland Bioengineering Institute, The University of Auckland, Auckland, New Zealand.
Thor BesierAuckland Bioengineering Institute, The University of Auckland, Auckland, New Zealand.

Funding

Thumb CMC Biomechanics and Early OA ProgressionR01AR059185 · NIAMS · RHODE ISLAND HOSPITAL · PI CRISCO, JOSEPH J · 2011 to 2020
$6.4M
NIAMS NIH HHS R01 AR059185
6 · The paper itself

Abstract

We propose an automatic pipeline for creating shape modelling suitable parametric meshes of the trapeziometacarpal (TMC) joint from clinical CT images for the purpose of batch processing and analysis. The method uses 3D random forest regression voting (RFRV) with statistical shape model (SSM) segmentation. The method was demonstrated in a validation experiment involving 65 CT images, 15 of which were randomly selected to be excluded from the training set for testing. With mean root mean squared (RMS) errors of 1.066 mm and 0.632 mm for the first metacarpal and trapezial bones respectively, and a segmentation time of ~2 minutes per CT image, the preliminary results showed promise for providing accurate 3D meshes of TMC joint bones for batch processing.

Indexed as

automatic segmentationmodel generationrandom forestregression votingstatistical shape modeltrapeziometacarpal

Identifiers

PMID31275767
PMCPMC6608596

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.