Evidence map›Paper›PMID 3127529›Full record

ArticleThe Journal of experimental medicine1988

Point mutations cause the somatic diversification of IgM and IgG2a antiphosphorylcholine antibodies.

N C Chien, R R Pollock, C Desaymard, M D Scharff

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 1988. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 64 citations in OpenAlex.

  1. Somatic immunoglobulin hypermutation.Current opinion in immunology · 2002
    Review
  2. A role for RAD51 in the generation of immunoglobulin gene diversity in rabbits.Journal of immunology (Baltimore, Md. : 1950) · 1999
    Article
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  13. Somatic mutation in constant regions of mouse lambda 1 light chains.Proceedings of the National Academy of Sciences of the United States of America · 1991
    Article
  14. Article
  15. Article
  16. Heavy-chain class switch does not terminate somatic mutation.The Journal of experimental medicine · 1990
    Article
  17. Article
  18. Article
  19. Protein evolution on rugged landscapes.Proceedings of the National Academy of Sciences of the United States of America · 1989
    Article
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

N C ChienDepartment of Cell Biology, Albert Einstein College of Medicine, Bronx, New York 10461.
R R Pollock
C Desaymard
M D Scharff
Albert Einstein College of Medicine · US

Funding

THE BIOLOGY OF THE IMMUNE SYSTEMP01AI010702 · NIAID · YESHIVA UNIVERSITY · PI DIAMOND, BETTY A · 1985 to 1991
–
SYNTHESIS AND ASSEMBLY OF MUTANT CONOCLONAL ANTIBODIESR01AI005231 · NIAID · YESHIVA UNIVERSITY · PI SCHARFF, MATTHEW D · 1985 to 1987
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SOMATIC CELL GENETICS OF IG GENESR35CA039838 · NCI · YESHIVA UNIVERSITY · PI SCHARFF, MATTHEW D · 1985 to 1998
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NCI NIH HHS CA-39838NIAID NIH HHS AI-05231NIAID NIH HHS AI-10702
6 · The paper itself

Abstract

The genetic mechanism responsible for the somatic diversification of two mAbs was determined. The two PC-binding hybridomas were representative of events early and late in the immune response. The P28 cell line that produces an IgM antibody and thus represents events early in the immune response, was found to have 3 bp changes in its heavy chain variable (VH) region, with some changes in antibody affinity or specificity. The RP93 cell line that produces an IgG2a antibody and thus represents later events in the immune response, was found to have 9 bp changes in its VH region resulting in decreased affinity for PC and altered specificity. Oligonucleotides specific for linked base changes in the second hypervariable regions of both of these antibodies were used to look for previously undescribed V regions or other donor sequences that could have been responsible for these base changes. Since no donor sequences were found, we have concluded that somatic point mutation rather than gene conversion, V region replacement or the expression of an unidentified germline VH region gene is truly responsible for at least some of the somatic diversification of these antibodies.

Indexed as

Genes, ImmunoglobulinAmino Acid SequenceAnimalsAntibodies, MonoclonalAntibody DiversityBase SequenceBinding Sites, AntibodyCholineImmunoglobulin GImmunoglobulin Heavy ChainsImmunoglobulin MImmunoglobulin Variable RegionMiceMice, Inbred BALB CMolecular Sequence DataMutationAntibodies, MonoclonalCholineImmunoglobulin GImmunoglobulin Heavy ChainsImmunoglobulin MImmunoglobulin Variable RegionPhosphorylcholine

Identifiers

PMID3127529
PMCPMC2188873
OpenAlexW2144013938

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.