Evidence map›Paper›PMID 31274303›Full record

ArticleJournal of the American Chemical Society2019

The Elusive 5'-Deoxyadenosyl Radical: Captured and Characterized by Electron Paramagnetic Resonance and Electron Nuclear Double Resonance Spectroscopies.

Hao Yang, Elizabeth C McDaniel, Stella Impano, Amanda S Byer, Richard J Jodts, Kenichi Yokoyama, William E Broderick, Joan B Broderick, Brian M Hoffman

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Highlighting the Unique Roles of RadicalJournal of bacteriology · 2022
    Review
  16. Article
  17. Article
  18. Review
  19. The Nitrogen Atom of Vitamin BInternational journal of molecular sciences · 2022
    Article
  20. The Atypical Cobalamin-DependentJournal of the American Chemical Society · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Hao YangDepartment of Chemistry , Northwestern University , Evanston , Illinois 60208 , United States.
Elizabeth C McDanielDepartment of Chemistry and Biochemistry , Montana State University , Bozeman , Montana 59717 , United States.
Stella ImpanoDepartment of Chemistry and Biochemistry , Montana State University , Bozeman , Montana 59717 , United States.
Amanda S ByerDepartment of Chemistry and Biochemistry , Montana State University , Bozeman , Montana 59717 , United States.
Richard J JodtsDepartment of Chemistry , Northwestern University , Evanston , Illinois 60208 , United States.
Kenichi YokoyamaDepartment of Biochemistry , Duke University , Durham , North Carolina 27710 , United States.ORCID 0000-0001-5625-469X
William E BroderickDepartment of Chemistry and Biochemistry , Montana State University , Bozeman , Montana 59717 , United States.
Joan B BroderickDepartment of Chemistry and Biochemistry , Montana State University , Bozeman , Montana 59717 , United States.ORCID 0000-0001-7057-9124
Brian M HoffmanDepartment of Chemistry , Northwestern University , Evanston , Illinois 60208 , United States.ORCID 0000-0002-3100-0746

Funding

Coboglobins-Cobalt-Substituted Hemoglobins and MyoglobinR01GM111097 · NIGMS · NORTHWESTERN UNIVERSITY · PI HOFFMAN, BRIAN M · 2014 to 2025
$6.7M
Iron-Sulfur Clusters in Biological Radical GenerationR01GM054608 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI BRODERICK, JOAN B · 2001 to 2018
$4.7M
Molecular Biophysics Training Program at Northwestern UniversityT32GM008382 · NIGMS · NORTHWESTERN UNIVERSITY · PI RADHAKRISHNAN, ISHWAR · 1990 to 2020
$4.3M
Radical SAM Enzymes: Radical Mechanisms Central to BiologyR35GM131889 · NIGMS · MONTANA STATE UNIVERSITY - BOZEMAN · PI Joan B Broderick · 2019 to 2026
$3.0M
Mechanism of cofactor biosynthesis required for chronic bacterial infectionR01GM112838 · NIGMS · DUKE UNIVERSITY · PI YOKOYAMA, KENICHI · 2015 to 2023
$2.8M
SPECTROSCOPIC STUDIES OF PYRUVATE FORMATE LYASE ACTIVASER29GM054608 · NIGMS · MICHIGAN STATE UNIVERSITY · PI BRODERICK, JOAN B. · 1997 to 2000
$102k
NIGMS NIH HHS R01 GM054608NIGMS NIH HHS R01 GM111097NIGMS NIH HHS R01 GM112838NIGMS NIH HHS R29 GM054608NIGMS NIH HHS R35 GM131889NIGMS NIH HHS T32 GM008382
6 · The paper itself

Abstract

The 5'-deoxyadenosyl radical (5'-dAdo·) abstracts a substrate H atom as the first step in radical-based transformations catalyzed by adenosylcobalamin-dependent and radical

Indexed as

Adenosylmethionine DecarboxylaseCobamidesDeoxyadenosinesFree RadicalsMagnetic Resonance SpectroscopyNucleic Acid Conformation5'-deoxyadenosineAdenosylmethionine DecarboxylasecobamamideCobamidesDeoxyadenosinesFree Radicals

Identifiers

PMID31274303
PMCPMC6784836

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.