Evidence map›Paper›PMID 31273247›Full record

ArticleScientific reports2019

Pleiotropic effects of rfa-gene mutations on Escherichia coli envelope properties.

Christophe Pagnout, Bénédicte Sohm, Angélina Razafitianamaharavo, Céline Caillet, Marc Offroy, Marjorie Leduc, Héloïse Gendre, Stéphane Jomini, Audrey Beaussart, Pascale Bauda and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
6.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 86 citations in OpenAlex.

  1. Microbiology (Reading, England) · 2026
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  14. OftenFrontiers in microbiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Christophe PagnoutUniversité de Lorraine, LIEC, UMR7360, Campus Bridoux, Metz, F-57070, France. christophe.pagnout@univ-lorraine.fr.
Bénédicte SohmUniversité de Lorraine, LIEC, UMR7360, Campus Bridoux, Metz, F-57070, France.
Angélina RazafitianamaharavoUniversité de Lorraine, LIEC, UMR7360, Vandoeuvre-lès-Nancy, F-54000, France.
Céline CailletUniversité de Lorraine, LIEC, UMR7360, Vandoeuvre-lès-Nancy, F-54000, France.ORCID http://orcid.org/0000-0003-2765-1885
Marc OffroyUniversité de Lorraine, LIEC, UMR7360, Vandoeuvre-lès-Nancy, F-54000, France.
Marjorie LeducPlateforme protéomique 3P5, Inserm U1016-Institut Cochin, Université Paris Descartes, MICUSPC, Paris, France.
Héloïse GendreUniversité de Lorraine, LIEC, UMR7360, Vandoeuvre-lès-Nancy, F-54000, France.ORCID http://orcid.org/0000-0003-1289-5684
Stéphane JominiANSES, 94701, Maisons-Alfort Cedex, France.
Audrey BeaussartUniversité de Lorraine, LIEC, UMR7360, Vandoeuvre-lès-Nancy, F-54000, France.
Pascale BaudaUniversité de Lorraine, LIEC, UMR7360, Campus Bridoux, Metz, F-57070, France.
Jérôme F L DuvalUniversité de Lorraine, LIEC, UMR7360, Vandoeuvre-lès-Nancy, F-54000, France.ORCID http://orcid.org/0000-0002-5458-3761
Laboratoire Interdisciplinaire des Environnements Continentaux · FRAgence Nationale de Sécurité Sanitaire de l’Alimentation, de l’Environnement et du Travail · FRDélégation Paris 5 · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations in the rfa operon leading to severely truncated lipopolysaccharide (LPS) structures are associated with pleiotropic effects on bacterial cells, which in turn generates a complex phenotype termed deep-rough. Literature reports distinct behavior of these mutants in terms of susceptibility to bacteriophages and to several antibacterial substances. There is so far a critical lack of understanding of such peculiar structure-reactivity relationships mainly due to a paucity of thorough biophysical and biochemical characterizations of the surfaces of these mutants. In the current study, the biophysicochemical features of the envelopes of Escherichia coli deep-rough mutants are identified from the molecular to the single cell and population levels using a suite of complementary techniques, namely microelectrophoresis, Atomic Force Microscopy (AFM) and Isobaric Tag for Relative and Absolute Quantitation (iTRAQ) for quantitative proteomics. Electrokinetic, nanomechanical and proteomic analyses evidence enhanced mutant membrane destabilization/permeability, and differentiated abundances of outer membrane proteins involved in the susceptibility phenotypes of LPS-truncated mutants towards bacteriophages, antimicrobial peptides and hydrophobic antibiotics. In particular, inner-core LPS altered mutants exhibit the most pronounced heterogeneity in the spatial distribution of their Young modulus and stiffness, which is symptomatic of deep damages on cell envelope likely to mediate phage infection process and antibiotic action.

Indexed as

MutationAnti-Bacterial AgentsCell MembraneCell Membrane PermeabilityEscherichia coliEscherichia coli ProteinsGlycosyltransferasesLipopolysaccharidesMembrane ProteinsMicroscopy, Atomic ForceProteomeAnti-Bacterial AgentsEscherichia coli ProteinsGlycosyltransferaseslipooligosaccharide 1,5-heptosyltransferaseLipopolysaccharidesMembrane ProteinsProteome

Identifiers

PMID31273247
PMCPMC6609704
OpenAlexW2954221542

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.