Evidence map›Paper›PMID 31273246›Full record

ArticleScientific reports2019

Discovery of food identity markers by metabolomics and machine learning technology.

Alexander Erban, Ines Fehrle, Federico Martinez-Seidel, Federico Brigante, Agustín Lucini Más, Veronica Baroni, Daniel Wunderlin, Joachim Kopka

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 74 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. Review
  12. Review
  13. Article
  14. Review
  15. MappingFoods (Basel, Switzerland) · 2021
    Article
  16. Review
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Alexander ErbanMax-Planck-Institute of Molecular Plant Physiology, Department of Molecular Physiology: Applied Metabolome Analysis, Am Mühlenberg 1, D-14476, Potsdam-Golm, Germany.
Ines FehrleMax-Planck-Institute of Molecular Plant Physiology, Department of Molecular Physiology: Applied Metabolome Analysis, Am Mühlenberg 1, D-14476, Potsdam-Golm, Germany.
Federico Martinez-SeidelMax-Planck-Institute of Molecular Plant Physiology, Department of Molecular Physiology: Applied Metabolome Analysis, Am Mühlenberg 1, D-14476, Potsdam-Golm, Germany.
Federico BriganteUniversidad Nacional de Córdoba, Facultad de Ciencias Químicas, Dpto. Química Orgánica, Córdoba, Argentina.
Agustín Lucini MásUniversidad Nacional de Córdoba, Facultad de Ciencias Químicas, Dpto. Química Orgánica, Córdoba, Argentina.
Veronica BaroniUniversidad Nacional de Córdoba, Facultad de Ciencias Químicas, Dpto. Química Orgánica, Córdoba, Argentina.
Daniel WunderlinUniversidad Nacional de Córdoba, Facultad de Ciencias Químicas, Dpto. Química Orgánica, Córdoba, Argentina.
Joachim KopkaMax-Planck-Institute of Molecular Plant Physiology, Department of Molecular Physiology: Applied Metabolome Analysis, Am Mühlenberg 1, D-14476, Potsdam-Golm, Germany. kopka@mpimp-golm.mpg.de.ORCID http://orcid.org/0000-0001-9675-4883
Max Planck Institute of Molecular Plant Physiology · DEUniversidad Nacional de Córdoba · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Verification of food authenticity establishes consumer trust in food ingredients and components of processed food. Next to genetic or protein markers, chemicals are unique identifiers of food components. Non-targeted metabolomics is ideally suited to screen food markers when coupled to efficient data analysis. This study explored feasibility of random forest (RF) machine learning, specifically its inherent feature extraction for non-targeted metabolic marker discovery. The distinction of chia, linseed, and sesame that have gained attention as "superfoods" served as test case. Chemical fractions of non-processed seeds and of wheat cookies with seed ingredients were profiled. RF technology classified original seeds unambiguously but appeared overdesigned for material with unique secondary metabolites, like sesamol or rosmarinic acid in the Lamiaceae, chia. Most unique metabolites were diluted or lost during cookie production but RF technology classified the presence of the seed ingredients in cookies with 6.7% overall error and revealed food processing markers, like 4-hydroxybenzaldehyde for chia and succinic acid monomethylester for linseed additions. RF based feature extraction was adequate for difficult classifications but marker selection should not be without human supervision. Combination with alternative data analysis technologies is advised and further testing of a wide range of seeds and food processing methods.

Indexed as

Machine LearningMetabolomeBiomarkersFlaxFood AnalysisFood HandlingHumansSalviaSeedsSesamumBiomarkers

Identifiers

PMID31273246
PMCPMC6609671
OpenAlexW2953499277

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.