Evidence map›Paper›PMID 31270536›Full record

ArticleMolecular biology and evolution2019

Recurrent Losses and Rapid Evolution of the Condensin II Complex in Insects.

Thomas D King, Christopher J Leonard, Jacob C Cooper, Son Nguyen, Eric F Joyce, Nitin Phadnis

Open access · hybridAbstract read
In one paragraph

Article in Molecular biology and evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 46 citations in OpenAlex.

  1. Cross-species incompatibilities offer new insights into the functional consequences of satellite DNA evolution.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2026
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  11. Molecular evolution of the mammalian kinetochore complex.bioRxiv : the preprint server for biology · 2024
    Article
  12. Article
  13. Article
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  16. Article
  17. Genome control by SMC complexes.Nature reviews. Molecular cell biology · 2023
    Review
  18. Function and Evolution of the Loop Extrusion Machinery in Animals.International journal of molecular sciences · 2023
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Thomas D KingSchool of Biological Sciences, University of Utah, Salt Lake City, UT.
Christopher J LeonardSchool of Biological Sciences, University of Utah, Salt Lake City, UT.
Jacob C CooperSchool of Biological Sciences, University of Utah, Salt Lake City, UT.
Son NguyenDepartment of Genetics, Penn Epigenetics Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA.
Eric F JoyceDepartment of Genetics, Penn Epigenetics Institute, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA.
Nitin PhadnisSchool of Biological Sciences, University of Utah, Salt Lake City, UT.
University of Utah · USUniversity of Pennsylvania · US

Funding

TRAINING PROGRAM IN GENETICST32GM007464 · NIGMS · UNIVERSITY OF UTAH · PI GRUNWALD, DAVID J., STANFIELD, GILLIAN · 1985 to 2020
$6.1M
Regulation of chromatin folding in space and timeR35GM128903 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Eric F. Joyce · 2018 to 2026
$4.2M
The molecular basis of speciation in DrosophilaR01GM115914 · NIGMS · UNIVERSITY OF UTAH · PI PHADNIS, NITIN · 2015 to 2019
$1.5M
NIGMS NIH HHS R01 GM115914NIGMS NIH HHS R35 GM128903NIGMS NIH HHS T32 GM007464
6 · The paper itself

Abstract

Condensins play a crucial role in the organization of genetic material by compacting and disentangling chromosomes. Based on studies in a few model organisms, the condensins I and II complexes are considered to have distinct functions, with the condensin II complex playing a role in meiosis and somatic pairing of homologous chromosomes in Drosophila. Intriguingly, the Cap-G2 subunit of condensin II is absent in Drosophila melanogaster, and this loss may be related to the high levels of chromosome pairing seen in flies. Here, we find that all three non-SMC subunits of condensin II (Cap-G2, Cap-D3, and Cap-H2) have been repeatedly and independently lost in taxa representing multiple insect orders, with some taxa lacking all three. We also find that all non-Dipteran insects display near-uniform low-pairing levels regardless of their condensin II complex composition, suggesting that some key aspects of genome organization are robust to condensin II subunit losses. Finally, we observe consistent signatures of positive selection in condensin subunits across flies and mammals. These findings suggest that these ancient complexes are far more evolutionarily labile than previously suspected, and are at the crossroads of several forms of genomic conflicts. Our results raise fundamental questions about the specific functions of the two condensin complexes in taxa that have experienced subunit losses, and open the door to further investigations to elucidate the diversity of molecular mechanisms that underlie genome organization across various life forms.

Indexed as

Evolution, MolecularAdenosine TriphosphatasesAnimalsDNA-Binding ProteinsInsectaMammalsMultiprotein ComplexesSelection, GeneticAdenosine Triphosphatasescondensin complexesDNA-Binding ProteinsMultiprotein Complexeschromosome pairingcondensinmolecular evolution

Identifiers

PMID31270536
PMCPMC6759200
OpenAlexW2955433488

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.