Evidence map›Paper›PMID 31270470›Full record

ArticleNature structural & molecular biology2019

Crystal structure of the tubulin tyrosine carboxypeptidase complex VASH1-SVBP.

Athanassios Adamopoulos, Lisa Landskron, Tatjana Heidebrecht, Foteini Tsakou, Onno B Bleijerveld, Maarten Altelaar, Joppe Nieuwenhuis, Patrick H N Celie, Thijn R Brummelkamp, Anastassis Perrakis

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In one paragraph

Article in Nature structural & molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 31 citations in OpenAlex.

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  16. Cytoskeletal cryptography: structure and mechanism of an eraser.Nature structural & molecular biology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Athanassios AdamopoulosDivision of Biochemistry, the Netherlands Cancer Institute, Amsterdam, the Netherlands.ORCID http://orcid.org/0000-0002-3544-4619
Lisa LandskronDivision of Biochemistry, the Netherlands Cancer Institute, Amsterdam, the Netherlands.
Tatjana HeidebrechtDivision of Biochemistry, the Netherlands Cancer Institute, Amsterdam, the Netherlands.
Foteini TsakouDivision of Biochemistry, the Netherlands Cancer Institute, Amsterdam, the Netherlands.
Onno B BleijerveldProteomics Facility, the Netherlands Cancer Institute, Amsterdam, the Netherlands.
Maarten AltelaarProteomics Facility, the Netherlands Cancer Institute, Amsterdam, the Netherlands.
Joppe NieuwenhuisDivision of Biochemistry, the Netherlands Cancer Institute, Amsterdam, the Netherlands.
Patrick H N CelieDivision of Biochemistry, the Netherlands Cancer Institute, Amsterdam, the Netherlands.
Thijn R BrummelkampDivision of Biochemistry, the Netherlands Cancer Institute, Amsterdam, the Netherlands.
Anastassis PerrakisDivision of Biochemistry, the Netherlands Cancer Institute, Amsterdam, the Netherlands. a.perrakis@nki.nl.ORCID http://orcid.org/0000-0002-1151-6227
The Netherlands Cancer Institute · NLAustrian Academy of Sciences · ATUtrecht University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cyclic enzymatic removal and ligation of the C-terminal tyrosine of α-tubulin generates heterogeneous microtubules and affects their functions. Here we describe the crystal and solution structure of the tubulin carboxypeptidase complex between vasohibin (VASH1) and small vasohibin-binding protein (SVBP), which folds in a long helix, which stabilizes the VASH1 catalytic domain. This structure, combined with molecular docking and mutagenesis experiments, reveals which residues are responsible for recognition and cleavage of the tubulin C-terminal tyrosine.

Indexed as

Carrier ProteinsCell Cycle ProteinsCrystallography, X-RayHumansMolecular Docking SimulationProtein ConformationProtein DomainsTubulinCarrier ProteinsCell Cycle ProteinsSVBP protein, humanTubulinVASH1 protein, human

Identifiers

PMID31270470
OpenAlexW2955265941

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.