Evidence map›Paper›PMID 31270419›Full record

ArticleScientific reports2019

Common BACE2 Polymorphisms are Associated with Altered Risk for Alzheimer's Disease and CSF Amyloid Biomarkers in APOE ε4 Non-Carriers.

Matt Huentelman, Matthew De Both, Wayne Jepsen, Ignazio S Piras, Joshua S Talboom, Mari Willeman, Eric M Reiman, John Hardy, Amanda J Myers

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 25 citations in OpenAlex.

  1. Effects of BACE2 polymorphisms on verbal memory in the general population.European archives of psychiatry and clinical neuroscience · 2026
    Article
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  3. Neuroprotective effects ofFrontiers in nutrition · 2026
    Article
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  9. Review
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  13. The emerging role of β-secretases in cancer.Journal of experimental & clinical cancer research : CR · 2021
    Review
  14. Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Matt HuentelmanNeurogenomics Division, The Translational Genomics Research Institute (TGen), Phoenix, AZ, USA. mhuentelman@tgen.org.
Matthew De BothNeurogenomics Division, The Translational Genomics Research Institute (TGen), Phoenix, AZ, USA.
Wayne JepsenNeurogenomics Division, The Translational Genomics Research Institute (TGen), Phoenix, AZ, USA.ORCID http://orcid.org/0000-0002-3020-6005
Ignazio S PirasNeurogenomics Division, The Translational Genomics Research Institute (TGen), Phoenix, AZ, USA.
Joshua S TalboomNeurogenomics Division, The Translational Genomics Research Institute (TGen), Phoenix, AZ, USA.
Mari WillemanNeurogenomics Division, The Translational Genomics Research Institute (TGen), Phoenix, AZ, USA.
Eric M ReimanThe Arizona Alzheimer's Consortium, Phoenix, AZ, USA.
John HardyDepartment of Molecular Neuroscience, Reta Lilla Weston Laboratories, and UK Dementia Research Institute at University College London, Institute of Neurology, London, United Kingdom.
Amanda J MyersDepartment of Psychiatry & Behavioral Sciences, Programs in Neuroscience and Human Genetics and Genomics and Center on Aging, Miller School of Medicine, University of Miami, Miami, FL, USA.
Alzheimer's Association · USUK Dementia Research Institute · GBUniversity of Miami · US

Funding

Alzheimer's Disease Neuroimaging Initiative - SupplementU01AG024904 · NIA · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI WEINER, MICHAEL W · 2004 to 2015
$121.0M
NATIONAL ALZHEIMERS COORDINATING CENTER (NACC)U01AG016976 · NIA · UNIVERSITY OF WASHINGTON · PI KUKULL, WALTER ANTHONY · 1999 to 2020
$72.8M
THERAPEUTIC EFFECTS OF INTRA-NASAL INSULIN DETEMIRP50AG005136 · NIA · UNIVERSITY OF WASHINGTON · PI GRABOWSKI, THOMAS J. · 1985 to 2019
$57.2M
WASHINGTON UNIVERSITY ALZHEIMERS DISEASE RESEARCH CENTERP50AG005681 · NIA · WASHINGTON UNIVERSITY · PI FAGAN, ANNE · 1985 to 2019
$52.1M
SUPPLEMENT TO RUSH ALZHEIMERS DISEASE CENTER COREP30AG010161 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI LEURGANS, SUE E. · 1991 to 2020
$49.1M
THE ROLE OF ADVANCED CAA IN ALZHEIMER'S DEMENTIAP50AG005134 · NIA · MASSACHUSETTS GENERAL HOSPITAL · PI HYMAN, BRADLEY T. · 1985 to 2018
$42.1M
'T V ASSESSMENT - MEMORY DISORDERED PATIENTS'P50AG005146 · NIA · JOHNS HOPKINS UNIVERSITY · PI ALBERT, MARILYN S. · 1985 to 2019
$37.6M
Research Education ComponentP30AG019610 · NIA · SUN HEALTH RESEARCH INSTITUTE · PI REIMAN, ERIC MICHAEL · 2001 to 2020
$32.5M
Neuropathology CoreP30AG013846 · NIA · BOSTON UNIVERSITY MEDICAL CAMPUS · PI KOWALL, NEIL W. · 1996 to 2020
$29.1M
UCLA ALZHEIMERS DISEASE RESEARCH CENTERP50AG016570 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CUMMINGS, JEFFREY L. · 1999 to 2014
$25.9M
Recruitment and Assessment Core Patient RecruitmentP50MH060451 · NIMH · DUKE UNIVERSITY · PI MCCARTHY, GREGORY E · 2001 to 2010
$22.3M
THE GENETICS OF PARKINSONISMP50NS039764 · NINDS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI VANCE, JEFFERY MARVIN · 1999 to 2010
$15.6M
CIHRMedical Research Council G0701075Medical Research Council G0901254Medical Research Council G1001253Medical Research Council G1100540Medical Research Council MR/J004758/1Medical Research Council MR/K01417X/1Medical Research Council MR/L501542/1NIA NIH HHS P30 AG010161NIA NIH HHS P30 AG013846NIA NIH HHS P30 AG019610NIA NIH HHS P30 AG053760NIA NIH HHS P50 AG005128NIA NIH HHS P50 AG005134NIA NIH HHS P50 AG005136NIA NIH HHS P50 AG005144NIA NIH HHS P50 AG005146NIA NIH HHS P50 AG005681NIA NIH HHS P50 AG016570NIA NIH HHS R01 AG034504NIA NIH HHS R01 AG041232NIA NIH HHS U01 AG016976NIA NIH HHS U01 AG024904NIMH NIH HHS HHSN271201300030CNIMH NIH HHS P50 MH060451NINDS NIH HHS P50 NS039764Parkinson's UK G-1307
6 · The paper itself

Abstract

It was recently suggested that beta-site amyloid precursor protein (APP)-cleaving enzyme 2 (BACE2) functions as an amyloid beta (Aβ)-degrading enzyme; in addition to its better understood role as an APP secretase. Due to this finding we sought to understand the possible genetic risk contributed by the BACE2 locus to the development of late-onset Alzheimer's disease (AD). In this study, we report that common single nucleotide polymorphism (SNP) variation in BACE2 is associated with altered AD risk in apolipoprotein E gene (APOE) epsilon 4 variant (ε4) non-carriers. In addition, in ε4 non-carriers diagnosed with AD or mild cognitive impairment (MCI), SNPs within the BACE2 locus are associated with cerebrospinal fluid (CSF) levels of Aβ1-42. Further, SNP variants in BACE2 are also associated with BACE2 RNA expression levels suggesting a potential mechanism for the CSF Aβ1-42 findings. Lastly, overexpression of BACE2 in vitro resulted in decreased Aβ1-40 and Aβ1-42 fragments in a cell line model of Aβ production. These findings suggest that genetic variation at the BACE2 locus modifies AD risk for those individuals who don't carry the ε4 variant of APOE. Further, our data indicate that the biological mechanism associated with this altered risk is linked to amyloid generation or clearance possibly through BACE2 expression changes.

Indexed as

Polymorphism, Single NucleotideAgedAlzheimer DiseaseAmyloid beta-PeptidesAmyloid Precursor Protein SecretasesApolipoprotein E4Aspartic Acid EndopeptidasesBiomarkersCase-Control StudiesCohort StudiesGenotypeHeterozygoteHumansNeuropsychological TestsAmyloid beta-PeptidesAmyloid Precursor Protein SecretasesApolipoprotein E4Aspartic Acid EndopeptidasesBACE2 protein, humanBiomarkers

Identifiers

PMID31270419
PMCPMC6610620
OpenAlexW2954967239

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.