Evidence map›Paper›PMID 31270080›Full record

ArticleBlood advances2019

Clinical and biological features of PTPN2-deleted adult and pediatric T-cell acute lymphoblastic leukemia.

Marion Alcantara, Mathieu Simonin, Ludovic Lhermitte, Aurore Touzart, Marie Emilie Dourthe, Mehdi Latiri, Nathalie Grardel, Jean Michel Cayuela, Yves Chalandon, Carlos Graux and 7 more

2 registry-linked trialsOpen access · goldAbstract read
In one paragraph

Article in Blood advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00222027 phase2completednot on this map

GRAALL 2003 Trial (ALL 15-59 Years). Feasibility of Risk-Adapted Therapy in Young Adult Acute Lymphoblastic Leukemia: a Multicenter Trial

TypeinterventionalSponsorUniversity Hospital, ToulouseRan2003 to 2008Enrolled300ConditionsAcute Lymphoblastic LeukemiaArmsCollection of treatment-stratefying prognostic factors
NCT00327678 phase3completednot on this map

Young Adult With Acute Lymphoblastic Leukemia (ALL) : a Multicentric Protocol. GRAALL 2005 : T ALL or B ALL Non Ph GRAALL 2005 R : B ALL Non Ph CD20+ GRAAPH 2005 : ALL Ph

TypeinterventionalSponsorAssistance Publique - Hôpitaux de ParisRan2006 to 2014Enrolled1,080ConditionsLeukemia, LymphocyticArmsRituximab, Imatinib Mesylate
3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Comprehensive analysis ofFrontiers in genetics · 2022
    Article
  6. Review
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  8. Review
  9. Article
  10. Frontiers in oncology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 3 countries.

Marion AlcantaraUniversité Paris Descartes Sorbonne Cité, Institut Necker-Enfants Malades, Institut National de Recherche Médicale U1151, Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, Paris, France.
Mathieu SimoninUniversité Paris Descartes Sorbonne Cité, Institut Necker-Enfants Malades, Institut National de Recherche Médicale U1151, Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, Paris, France.
Ludovic LhermitteUniversité Paris Descartes Sorbonne Cité, Institut Necker-Enfants Malades, Institut National de Recherche Médicale U1151, Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, Paris, France.
Aurore TouzartUniversité Paris Descartes Sorbonne Cité, Institut Necker-Enfants Malades, Institut National de Recherche Médicale U1151, Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, Paris, France.
Marie Emilie DourtheUniversité Paris Descartes Sorbonne Cité, Institut Necker-Enfants Malades, Institut National de Recherche Médicale U1151, Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, Paris, France.
Mehdi LatiriUniversité Paris Descartes Sorbonne Cité, Institut Necker-Enfants Malades, Institut National de Recherche Médicale U1151, Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, Paris, France.
Nathalie GrardelLaboratory of Hematology, Centre Hospitalier Régional Universitaire de Lille, Lille, France.ORCID 0000-0001-6573-1312
Jean Michel CayuelaLaboratory of Hematology, Saint-Louis Hospital, Assistance Publique-Hôpitaux de Paris, Paris, France.
Yves ChalandonSwiss Group for Clinical Cancer Research, Bern, Hôpital Universitaire, Geneva, Switzerland.ORCID 0000-0001-9341-8104
Carlos GrauxUniversité Catholique de Louvain, Centre Hospitalier Universitaire, Namur, Yvoir, Belgium.
Hervé DombretAdolescent and Young Adult Hematology Unit, Saint-Louis Hospital, Assistance Publique-Hôpitaux de Paris, Paris, France; and.ORCID 0000-0002-5454-6768
Norbert IfrahCentre Hospitalier Universitaire d'Angers, Angers, France.ORCID 0000-0003-3063-850X
Arnaud PetitDepartment of Pediatric Hematology and Oncology, Assistance Publique-Hôpitaux de Paris, Groupe Hospitalier des Hôpitaux Universitaires Est Parisien, Armand Trousseau Hospital, Paris, France.ORCID 0000-0001-8363-1622
Elizabeth MacintyreUniversité Paris Descartes Sorbonne Cité, Institut Necker-Enfants Malades, Institut National de Recherche Médicale U1151, Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, Paris, France.
André BaruchelDepartment of Pediatric Hematology and Immunology, Assistance Publique-Hôpitaux de Paris, Hôpital Universitaire Robert-Debré, Paris, France.
Nicolas BoisselAdolescent and Young Adult Hematology Unit, Saint-Louis Hospital, Assistance Publique-Hôpitaux de Paris, Paris, France; and.
Vahid AsnafiUniversité Paris Descartes Sorbonne Cité, Institut Necker-Enfants Malades, Institut National de Recherche Médicale U1151, Laboratory of Onco-Hematology, Assistance Publique-Hôpitaux de Paris, Hôpital Necker Enfants-Malades, Paris, France.
Hôpital Necker-Enfants Malades · FRAssistance Publique – Hôpitaux de Paris · FRCentre Hospitalier Universitaire d'Angers · FRCentre Hospitalier Universitaire de Lille · FRSorbonne Université · FRSwiss Group For Clinical Cancer Research · CHUCLouvain · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein tyrosine phosphatase nonreceptor type 2 (PTPN2) is a phosphatase known to be a tumor suppressor gene in T-cell acute lymphoblastic leukemia (T-ALL). Because the full clinicobiologic characteristics of PTPN2 loss remain poorly reported, we aimed to provide a comprehensive analysis of PTPN2 deletions within a cohort of 430 patients, including 216 adults and 214 children treated according to the GRAALL03/05 (#NCT00222027 and #NCT00327678) and the FRALLE2000 protocols, respectively. We used multiplex ligation-dependent probe amplification to identify an 8% incidence of PTPN2 deletion, which was comparable in adult (9%) and pediatric (6%) populations. PTPN2 deletions were significantly associated with an αβ lineage and TLX1 deregulation. Analysis of the mutational genotype of adult T-ALL revealed a positive correlation between PTPN2 deletions and gain-of-function alterations in the IL7R/JAK-STAT signaling pathway as well as PHF6 and WT1 mutations. Of note, PTPN2 and PTEN (phosphatase and tensin homolog) deletions were mutually exclusive. Regarding treatment response, PTPN2-deleted T-ALLs were associated with a higher glucocorticoid response and a trend for improved survival in children, but not in adults, with a 5-year cumulative incidence of relapse of 8% for PTPN2-deleted pediatric cases vs 26% (

Indexed as

AdolescentAdultAllelesBiomarkers, TumorFemaleGene FrequencyGenotypeHigh-Throughput Nucleotide SequencingHumansImmunophenotypingInterleukin-7 Receptor alpha SubunitJanus KinasesMaleMiddle AgedPrecursor T-Cell Lymphoblastic Leukemia-LymphomaPrognosisBiomarkers, TumorIL7R protein, humanInterleukin-7 Receptor alpha SubunitJanus KinasesProtein Tyrosine Phosphatase, Non-Receptor Type 2PTPN2 protein, humanSTAT Transcription Factors

Identifiers

PMID31270080
PMCPMC6616254
OpenAlexW2954537706

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.