Evidence map›Paper›PMID 31269446›Full record

ArticleCell reports2019

CPF Recruitment to Non-canonical Transcription Termination Sites Triggers Heterochromatin Assembly and Gene Silencing.

Tommy V Vo, Jothy Dhakshnamoorthy, Madeline Larkin, Martin Zofall, Gobi Thillainadesan, Vanivilasini Balachandran, Sahana Holla, David Wheeler, Shiv I S Grewal

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 45 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Tommy V VoLaboratory of Biochemistry and Molecular Biology, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Jothy DhakshnamoorthyLaboratory of Biochemistry and Molecular Biology, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Madeline LarkinLaboratory of Biochemistry and Molecular Biology, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Martin ZofallLaboratory of Biochemistry and Molecular Biology, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Gobi ThillainadesanLaboratory of Biochemistry and Molecular Biology, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Vanivilasini BalachandranLaboratory of Biochemistry and Molecular Biology, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Sahana HollaLaboratory of Biochemistry and Molecular Biology, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
David WheelerLaboratory of Biochemistry and Molecular Biology, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Shiv I S GrewalLaboratory of Biochemistry and Molecular Biology, National Cancer Institute, NIH, Bethesda, MD 20892, USA. Electronic address: grewals@mail.nih.gov.
National Cancer Institute · US

Funding

RNAi and Epigenetic Control of Higher-Order Chromatin AssemblyZIABC010523 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI GREWAL, SHIVINDER S · 2009 to 2025
$28.1M
Roles of Chromatin-modifying Factors in Epigenetic Control of the GenomeZIABC011208 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI GREWAL, SHIVINDER S · 2009 to 2025
$28.1M
RNAi and Epigenetic Control of Higher-Order Chromatin AssemblyZ01BC010523 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI GREWAL, SHIVINDER S · 2003 to 2008
$4.4M
Investigating the traffic-control mechanisms directing epigenetic gene regulationFI2GM123947 · NIGMS · NATIONAL CANCER INSTITUTE · PI VO, TOMMY V · 2017 to 2017
–
Intramural NIH HHS Z01 BC010523Intramural NIH HHS Z99 CA999999Intramural NIH HHS ZIA BC010523Intramural NIH HHS ZIA BC011208NIGMS NIH HHS FI2 GM123947
6 · The paper itself

Abstract

In eukaryotic genomes, heterochromatin is targeted by RNAi machinery and/or by pathways requiring RNA elimination and transcription termination factors. However, a direct connection between termination machinery and RNA polymerase II (RNAPII) transcriptional activity at heterochromatic loci has remained elusive. Here, we show that, in fission yeast, the conserved cleavage and polyadenylation factor (CPF) is a key component involved in RNAi-independent assembly of constitutive and facultative heterochromatin domains and that CPF is broadly required to silence genes regulated by Clr4

Indexed as

Gene SilencingTranscription Termination, GeneticCell Cycle ProteinsChromatin Assembly and DisassemblyExoribonucleasesGene Expression Regulation, FungalHeterochromatinHistone-Lysine N-MethyltransferaseMeiosismRNA Cleavage and Polyadenylation FactorsPhosphoprotein PhosphatasesRNA InterferenceRNA, Long NoncodingRNA Polymerase IISchizosaccharomycesSchizosaccharomyces pombe ProteinsCell Cycle Proteinsclr4 protein, S pombedhp1 protein, S pombeExoribonucleasesHeterochromatinHistone-Lysine N-MethyltransferaseMmi1 protein, S pombemRNA Cleavage and Polyadenylation FactorsPhosphoprotein PhosphatasesRNA, Long NoncodingRNA Polymerase IISchizosaccharomyces pombe Proteinsssu72 protein, S pombeCPFfacultativegene silencingheterochromatinhistone methylationMmi1pre-mRNA processingRNA polymerase IItranscription terminationYTH

Identifiers

PMID31269446
PMCPMC7457318
OpenAlexW2953919993

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.