Evidence map›Paper›PMID 31269090›Full record

ArticlePLoS pathogens2019

Perturbations of the ZED1 pseudokinase activate plant immunity.

D Patrick Bastedo, Madiha Khan, Alexandre Martel, Derek Seto, Inga Kireeva, Jianfeng Zhang, Wardah Masud, David Millar, Jee Yeon Lee, Amy Huei-Yi Lee and 4 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
9.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 52 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. ZAR1: Guardian of plant kinases.Frontiers in plant science · 2022
    Review
  14. The small molecule Zaractin activates ZAR1-mediated immunity inProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Tandem Protein Kinases Emerge as New Regulators of Plant Immunity.Molecular plant-microbe interactions : MPMI · 2021
    Review
  16. Review
  17. Article
  18. Immunodiversity of theFrontiers in plant science · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

D Patrick BastedoDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0002-7698-7994
Madiha KhanDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.
Alexandre MartelDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.
Derek SetoDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.
Inga KireevaCentre for the Analysis of Genome Evolution & Function, University of Toronto, Toronto, Ontario, Canada.
Jianfeng ZhangDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.
Wardah MasudDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0003-3291-9188
David MillarDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0002-5076-2623
Jee Yeon LeeCentre for the Analysis of Genome Evolution & Function, University of Toronto, Toronto, Ontario, Canada.
Amy Huei-Yi LeeDepartment of Microbiology and Immunology, University of British Columbia, Vancouver, British Columbia, Canada.ORCID 0000-0003-3250-3246
Yunchen GongCentre for the Analysis of Genome Evolution & Function, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0001-6596-8846
André Santos-SeverinoCentre for the Analysis of Genome Evolution & Function, University of Toronto, Toronto, Ontario, Canada.
David S GuttmanDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.
Darrell DesveauxDepartment of Cell and Systems Biology, University of Toronto, Toronto, Ontario, Canada.ORCID 0000-0003-4270-2791
University of Toronto · CAUniversity of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Pseudomonas syringae acetyltransferase HopZ1a is delivered into host cells by the type III secretion system to promote bacterial growth. However, in the model plant host Arabidopsis thaliana, HopZ1a activity results in an effector-triggered immune response (ETI) that limits bacterial proliferation. HopZ1a-triggered immunity requires the nucleotide-binding, leucine-rich repeat domain (NLR) protein, ZAR1, and the pseudokinase, ZED1. Here we demonstrate that HopZ1a can acetylate members of a family of 'receptor-like cytoplasmic kinases' (RLCK family VII; also known as PBS1-like kinases, or PBLs) and promote their interaction with ZED1 and ZAR1 to form a ZAR1-ZED1-PBL ternary complex. Interactions between ZED1 and PBL kinases are determined by the pseudokinase features of ZED1, and mutants designed to restore ZED1 kinase motifs can (1) bind to PBLs, (2) recruit ZAR1, and (3) trigger ZAR1-dependent immunity in planta, all independently of HopZ1a. A ZED1 mutant that mimics acetylation by HopZ1a also triggers immunity in planta, providing evidence that effector-induced perturbations of ZED1 also activate ZAR1. Overall, our results suggest that interactions between these two RLCK families are promoted by perturbations of structural features that distinguish active from inactive kinase domain conformations. We propose that effector-induced interactions between ZED1/ZRK pseudokinases (RLCK family XII) and PBL kinases (RLCK family VII) provide a sensitive mechanism for detecting perturbations of either kinase family to activate ZAR1-mediated ETI.

Indexed as

Plant ImmunityAcetylationArabidopsisArabidopsis ProteinsBacterial ProteinsCarrier ProteinsHost Microbial InteractionsIntracellular Signaling Peptides and ProteinsModels, ImmunologicalMutationPhosphotransferasesProtein Interaction Domains and MotifsProtein KinasesPseudomonas syringaeArabidopsis ProteinsBacterial ProteinsCarrier ProteinsIntracellular Signaling Peptides and ProteinsPhosphotransferasesProtein KinasesZAR1 protein, ArabidopsisZED1 protein, Arabidopsis

Identifiers

PMID31269090
PMCPMC6634424
OpenAlexW2955362111

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.