Evidence map›Paper›PMID 31268696›Full record

ArticleEnvironmental science & technology2019

Cell-Based Metabolomics for Untargeted Screening and Prioritization of Vertebrate-Active Stressors in Streams Across the United States.

Timothy W Collette, Drew R Ekman, Huajun Zhen, Ha Nguyen, Paul M Bradley, Quincy Teng

Open access · bronzeAbstract read
In one paragraph

Article in Environmental science & technology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Timothy W ColletteU.S. Environmental Protection Agency , National Exposure Research Laboratory , Athens , Georgia 30605 , United States.ORCID http://orcid.org/0000-0003-1946-0878
Drew R EkmanU.S. Environmental Protection Agency , National Exposure Research Laboratory , Athens , Georgia 30605 , United States.
Huajun ZhenU.S. Environmental Protection Agency , National Exposure Research Laboratory , Athens , Georgia 30605 , United States.
Ha NguyenU.S. Environmental Protection Agency , National Exposure Research Laboratory , Athens , Georgia 30605 , United States.
Paul M BradleyU.S. Geological Survey , South Atlantic Water Science Center , Columbia , South Carolina 29210 , United States.ORCID http://orcid.org/0000-0001-7522-8606
Quincy TengU.S. Environmental Protection Agency , National Exposure Research Laboratory , Athens , Georgia 30605 , United States.
Environmental Protection Agency · USUnited States Geological Survey · US

Funding

Intramural EPA EPA999999
6 · The paper itself

Abstract

The U.S. Geological Survey and the U.S. Environmental Protection Agency have assessed contaminants in 38 streams across the U.S., using an extensive suite of target-chemical analysis methods along with a variety of biological effects tools. Here, we report zebrafish liver (ZFL) cell-culture based NMR metabolomic analysis of these split stream samples. We used this untargeted approach to evaluate the sites according to overall impact on the ZFL metabolome and found that neither the total number of organics detected at the sites, nor their cumulative concentrations, were good predictors of these impacts. Further, we used partial least squares regression to compare ZFL endogenous metabolite profiles to values for 455 potential stressors (organics, inorganics, and physical properties) measured in these waters and found that the profiles covaried with at most 280 of the stressors, which were subsequently ranked into quartiles based on the strength of their covariance. While contaminants of emerging concern (CECs) were well represented in the top, most strongly covarying quartile-suggesting considerable potential for eliciting biological responses at these sites-there was even higher representation of various well-characterized legacy contaminants (e.g., PCBs). These results emphasize the importance of complementing chemical analysis with untargeted bioassays to help focus regulatory efforts on the most significant ecosystem threats.

Indexed as

RiversWater Pollutants, ChemicalAnimalsEcosystemEnvironmental MonitoringMetabolomicsUnited StatesWater Pollutants, Chemical

Identifiers

PMID31268696
PMCPMC6755663
OpenAlexW2953860966

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.