Evidence map›Paper›PMID 31267065›Full record

ReviewNature reviews. Molecular cell biology2019

Roles and regulation of histone methylation in animal development.

Ashwini Jambhekar, Abhinav Dhall, Yang Shi

Erratum issuedAbstract readReview
In one paragraph

Review in Nature reviews. Molecular cell biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 327 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
327citing papers in PubMed, 1 pooled it
20.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

327 citing papers in PubMed, 1 synthesis or guideline pooled it, 549 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Precision Chemistry for Protein Lysine Modification.Chemistry (Weinheim an der Bergstrasse, Germany) · 2026
    Review
  5. Review
  6. Article
  7. Review
  8. Article
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  10. Article
  11. Article
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  13. Review
  14. Article
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  16. Epidrugs in cancer: mechanisms, applications, and future direction.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Review
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  18. Article
  19. Article
  20. Article

267 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Ashwini JambhekarNewborn Medicine, Boston Children's Hospital, Boston, MA, USA. ashwini_jambhekar@hms.harvard.edu.ORCID http://orcid.org/0000-0003-1078-6601
Abhinav DhallNewborn Medicine, Boston Children's Hospital, Boston, MA, USA.
Yang ShiNewborn Medicine, Boston Children's Hospital, Boston, MA, USA. yang_shi@hms.harvard.edu.
Boston Children's Hospital · US

Funding

Novel epigenetic mechanisms in neuronal development and cognitive functionR01MH096066 · NIMH · BOSTON CHILDREN'S HOSPITAL · PI ARLOTTA, PAOLA, POMEROY, SCOTT LOREN · 2012 to 2022
$6.1M
Epigenetic regulation of cellular plasticity and cancer cell fateR35CA210104 · NCI · BOSTON CHILDREN'S HOSPITAL · PI SHI, YANG · 2017 to 2019
$2.8M
Investigation of roles and mechanisms of DNA and histone modification networks in trans-generational epigenetic inheritanceR01GM117264 · NIGMS · BOSTON CHILDREN'S HOSPITAL · PI SHI, YANG · 2016 to 2019
$1.6M
NCI NIH HHS R35 CA210104NIGMS NIH HHS R01 GM117264NIMH NIH HHS R01 MH096066
6 · The paper itself

Abstract

Histone methylation can occur at various sites in histone proteins, primarily on lysine and arginine residues, and it can be governed by multiple positive and negative regulators, even at a single site, to either activate or repress transcription. It is now apparent that histone methylation is critical for almost all stages of development, and its proper regulation is essential for ensuring the coordinated expression of gene networks that govern pluripotency, body patterning and differentiation along appropriate lineages and organogenesis. Notably, developmental histone methylation is highly dynamic. Early embryonic systems display unique histone methylation patterns, prominently including the presence of bivalent (both gene-activating and gene-repressive) marks at lineage-specific genes that resolve to monovalent marks during differentiation, which ensures that appropriate genes are expressed in each tissue type. Studies of the effects of methylation on embryonic stem cell pluripotency and differentiation have helped to elucidate the developmental roles of histone methylation. It has been revealed that methylation and demethylation of both activating and repressive marks are essential for establishing embryonic and extra-embryonic lineages, for ensuring gene dosage compensation via genomic imprinting and for establishing body patterning via HOX gene regulation. Not surprisingly, aberrant methylation during embryogenesis can lead to defects in body patterning and in the development of specific organs. Human genetic disorders arising from mutations in histone methylation regulators have revealed their important roles in the developing skeletal and nervous systems, and they highlight the overlapping and unique roles of different patterns of methylation in ensuring proper development.

Indexed as

AnimalsBody PatterningCell DifferentiationEmbryonic DevelopmentGene Expression Regulation, DevelopmentalHistonesHumansMethylationPluripotent Stem CellsProtein Processing, Post-TranslationalHistones

Identifiers

PMID31267065
PMCPMC6774358
OpenAlexW2955543783

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.