Evidence map›Paper›PMID 31266808›Full record

ArticleThe Journal of biological chemistry2019

Dysregulation of histone H3 lysine 27 trimethylation in transforming growth factor-β1-induced gene expression in mesangial cells and diabetic kidney.

Ye Jia, Marpadga A Reddy, Sadhan Das, Hyung Jung Oh, Maryam Abdollahi, Hang Yuan, Erli Zhang, Linda Lanting, Mei Wang, Rama Natarajan

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 1 pooled it
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 1 synthesis or guideline pooled it, 73 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Post‑translational modifications in diabetic kidney disease (Review).International journal of molecular medicine · 2026
    Review
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  11. Update: the role of epigenetics in the metabolic memory of diabetic complications.American journal of physiology. Renal physiology · 2024
    Review
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  13. Article
  14. Review
  15. Metabolic memory: mechanisms and diseases.Signal transduction and targeted therapy · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Ye JiaDepartment of Diabetes Complications and Metabolism, Beckman Research Institute of City of Hope, Duarte, California 91010.
Marpadga A ReddyDepartment of Diabetes Complications and Metabolism, Beckman Research Institute of City of Hope, Duarte, California 91010 mreddy@coh.org.
Sadhan DasDepartment of Diabetes Complications and Metabolism, Beckman Research Institute of City of Hope, Duarte, California 91010.ORCID 0000-0002-7153-9519
Hyung Jung OhDepartment of Diabetes Complications and Metabolism, Beckman Research Institute of City of Hope, Duarte, California 91010.
Maryam AbdollahiDepartment of Diabetes Complications and Metabolism, Beckman Research Institute of City of Hope, Duarte, California 91010.
Hang YuanDepartment of Diabetes Complications and Metabolism, Beckman Research Institute of City of Hope, Duarte, California 91010.
Erli ZhangDepartment of Diabetes Complications and Metabolism, Beckman Research Institute of City of Hope, Duarte, California 91010.
Linda LantingDepartment of Diabetes Complications and Metabolism, Beckman Research Institute of City of Hope, Duarte, California 91010.
Mei WangDepartment of Diabetes Complications and Metabolism, Beckman Research Institute of City of Hope, Duarte, California 91010.
Rama NatarajanDepartment of Diabetes Complications and Metabolism, Beckman Research Institute of City of Hope, Duarte, California 91010 rnatarajan@coh.org.
City of Hope · USJilin University · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNEwha Womans University · KR

Funding

Transgenic Mouse FacilityP30CA033572 · NCI · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI John Charles Williams · 1985 to 2026
$86.3M
Inflammatory Gene Transcription In Diabetic ConditionsR01DK065073 · NIDDK · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI NATARAJAN, RAMA · 2003 to 2021
$7.9M
Transcriptional Regulation by Angiotensin II in Vascular Smooth Muscle CellsR01HL106089 · NHLBI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NATARAJAN, RAMA · 2011 to 2024
$6.6M
Transforming growth factor beta1, microRNAs, lncRNA and diabetic nephropathyR01DK081705 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NATARAJAN, RAMA · 2009 to 2023
$6.1M
ROLE OF 12-LIPOXYGENASE IN DIABETIC NEPHROPATHYR01DK058191 · NIDDK · CITY OF HOPE/BECKMAN RESEARCH INSTITUTE · PI NATARAJAN, RAMA · 2001 to 2016
$5.3M
Epigenetic Markers of Complications and Metabolic Memory in the DCCT/EDIC cohort.DP3DK106917 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NATARAJAN, RAMA · 2015 to 2015
$2.2M
NCI NIH HHS P30 CA033572NHLBI NIH HHS R01 HL106089NIDDK NIH HHS DP3 DK106917NIDDK NIH HHS R01 DK058191NIDDK NIH HHS R01 DK065073NIDDK NIH HHS R01 DK081705
6 · The paper itself

Abstract

Transforming growth factor-β1 (TGF-β)-induced fibrotic and inflammatory genes in renal mesangial cells (MCs) play important roles in glomerular dysfunction associated with diabetic nephropathy (DN). TGF-β regulates gene expression in MCs by altering key chromatin histone modifications at target gene promoters. However, the role of the repressive histone H3 lysine 27 trimethylation (H3K27me3) modification is unclear. Here we show that TGF-β reduces H3K27me3 at the

Indexed as

Gene Expression RegulationAnimalsCells, CulturedDiabetes Mellitus, Type 1Diabetic NephropathiesHistonesHumansInjections, IntraperitonealLysineMaleMesangial CellsMethylationMiceMice, Inbred C57BLRatsRats, Sprague-DawleyHistonesLysineStreptozocinTransforming Growth Factor beta1diabetic nephropathyepigeneticsEzh2fibrosisH3K27me3histone demethylaseshistone methylationhistone modificationsinflammationmesangial cellsmicroRNA (miRNA)transforming growth factor beta (TGF-β)

Identifiers

PMID31266808
PMCPMC6709639
OpenAlexW2954469510

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.