Evidence map›Paper›PMID 31265121›Full record

ArticleInternational journal of cancer2020

Whole-exome sequencing of ovarian cancer families uncovers putative predisposition genes.

Qianqian Zhu, Jianmin Zhang, Yanmin Chen, Qiang Hu, He Shen, Ruea-Yea Huang, Qian Liu, Jasmine Kaur, Mark Long, Sebastiano Battaglia and 9 more

Open access · hybridAbstract read
In one paragraph

Article in International journal of cancer, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Translational lung cancer research · 2025
    Article
  5. Article
  6. Article
  7. Hereditary cancer syndromes.World journal of clinical oncology · 2023
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Peripheral bloodJournal of gynecologic oncology · 2021
    Article
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 2 institutions in 1 country.

Qianqian ZhuDepartment of Biostatistics & Bioinformatics, Roswell Park Comprehensive Cancer Center, Buffalo, NY.ORCID 0000-0003-2516-6675
Jianmin ZhangDepartment of Cancer Genetics and Genomics, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Yanmin ChenDepartment of Cancer Genetics and Genomics, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Qiang HuDepartment of Biostatistics & Bioinformatics, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
He ShenDepartment of Cancer Genetics and Genomics, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Ruea-Yea HuangCenter for Immunotherapy, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Qian LiuDepartment of Biostatistics & Bioinformatics, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Jasmine KaurDepartment of Gynecologic Oncology, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Mark LongDepartment of Biostatistics & Bioinformatics, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Sebastiano BattagliaCenter for Immunotherapy, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Kevin H EngDepartment of Biostatistics & Bioinformatics, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Shashikant B LeleDepartment of Gynecologic Oncology, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Emese ZsirosDepartment of Gynecologic Oncology, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Jeannine VillellaDivision of Gynecologic Oncology, Lenox Hill Hospital/ Northwell Health Cancer Institute, Donald and Barbara Zucker School of Medicine at Hofstra/Northwell, New York, NY.
Amit LugadeCenter for Immunotherapy, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Song YaoDepartment of Cancer Prevention and Control, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Song LiuDepartment of Biostatistics & Bioinformatics, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Kirsten MoysichDepartment of Cancer Prevention and Control, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Kunle O OdunsiCenter for Immunotherapy, Roswell Park Comprehensive Cancer Center, Buffalo, NY.
Roswell Park Comprehensive Cancer Center · USNorthwell Health · US

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MARK G FRATTINI · 1985 to 2026
$116.6M
University of Buffalo Clinical and Translational Science Institute - Supplement SchulyerUL1TR001412 · NCATS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI MURPHY, TIMOTHY F · 2015 to 2024
$33.8M
RPCI-UPCI Ovarian Cancer SPOREP50CA159981 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MOYSICH, KIRSTEN B. · 2013 to 2025
$19.6M
Immuno-Oncology Translation Network: Data Management and Resource-Sharing Center at RPCIU24CA232979 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI HUTSON, ALAN DAVID, LIU, SONG · 2018 to 2024
$8.9M
Network Lead Academic Participating Site Grant from the Roswell Park Cancer InstituteUG1CA233191 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI LELE, SHASHIKANT, LEVINE, ELLIS G · 2019 to 2025
$3.1M
The role of TAZ in breast cancer initiation and progressionR01CA207504 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI ZHANG, JIANMIN · 2017 to 2021
$2.0M
NCATS NIH HHS UL1 TR001412NCI NIH HHS P30 CA016056NCI NIH HHS P50 CA159981NCI NIH HHS R01 CA207504NCI NIH HHS U24 CA232979NCI NIH HHS UG1 CA233191
6 · The paper itself

Abstract

Despite the identification of several ovarian cancer (OC) predisposition genes, a large proportion of familial OC risk remains unexplained. We adopted a two-stage design to identify new OC predisposition genes. We first carried out a large germline whole-exome sequencing study on 158 patients from 140 families with significant OC history, but without evidence of genetic predisposition due to BRCA1/2. We then evaluated the potential candidate genes in a large case-control association study involving 381 OC cases in the Cancer Genome Atlas project and 27,173 population controls from the Exome Aggregation Consortium. Two new putative OC risk genes were identified, namely, ANKRD11, a putative tumor suppressor, and POLE, an enzyme involved in DNA repair and replication. These two genes likely confer moderate OC risk. We performed in vitro experiments and showed an ANKRD11 mutation identified in our patients markedly lowered the protein expression by compromising protein stability. Upon future validation and functional characterization, these genes may shed light on cancer etiology along with improving ascertainment power and preventive care of individuals at high risk of OC.

Indexed as

AdolescentAdultAgedAged, 80 and overBRCA1 ProteinBRCA2 ProteinCarcinoma, Ovarian EpithelialCase-Control StudiesChildExome SequencingFemaleGenes, BRCA1Genes, BRCA2Genetic Predisposition to DiseaseHEK293 CellsHumansANKRD11 protein, humanBRCA1 ProteinBRCA1 protein, humanBRCA2 ProteinBRCA2 protein, humanRepressor Proteinscancer predispositioncancer riskgynecological cancerhereditary ovarian cancerwhole-exome sequencing

Identifiers

PMID31265121
PMCPMC7065147
OpenAlexW2956090299

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.