Evidence map›Paper›PMID 31265063›Full record

ArticleJournal of the American Medical Informatics Association : JAMIA2019

Identifying vulnerable older adult populations by contextualizing geriatric syndrome information in clinical notes of electronic health records.

Tao Chen, Mark Dredze, Jonathan P Weiner, Hadi Kharrazi

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of the American Medical Informatics Association : JAMIA, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 5 pooled it
2.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 5 syntheses or guidelines pooled it, 35 citations in OpenAlex.

  1. Pooled it
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  4. The use of natural language processing in detecting and predicting falls within the healthcare setting: a systematic review.International journal for quality in health care : journal of the International Society for Quality in Health Care · 2023
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  11. Machine learning approaches for electronic health records phenotyping: a methodical review.Journal of the American Medical Informatics Association : JAMIA · 2023
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  18. Examining the Interfacility Variation of Social Determinants of Health in the Veterans Health Administration.Federal practitioner : for the health care professionals of the VA, DoD, and PHS · 2021
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  19. Article
  20. Health informatics and health equity: improving our reach and impact.Journal of the American Medical Informatics Association : JAMIA · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Tao ChenCenter for Language and Speech Processing, Johns Hopkins Whiting School of Engineering, Baltimore, Maryland, USA.
Mark DredzeDepartment of Computer Science, Johns Hopkins Whiting School of Engineering, Baltimore, Maryland, USA.
Jonathan P WeinerCenter for Population Health IT, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA.
Hadi KharraziCenter for Population Health IT, Johns Hopkins Bloomberg School of Public Health, Baltimore, Maryland, USA.
Johns Hopkins University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveGeriatric syndromes such as functional disability and lack of social support are often not encoded in electronic health records (EHRs), thus obscuring the identification of vulnerable older adults in need of additional medical and social services. In this study, we automatically identify vulnerable older adult patients with geriatric syndrome based on clinical notes extracted from an EHR system, and demonstrate how contextual information can improve the process. MATERIALS AND

methodsWe propose a novel end-to-end neural architecture to identify sentences that contain geriatric syndromes. Our model learns a representation of the sentence and augments it with contextual information: surrounding sentences, the entire clinical document, and the diagnosis codes associated with the document. We trained our system on annotated notes from 85 patients, tuned the model on another 50 patients, and evaluated its performance on the rest, 50 patients.

resultsContextual information improved classification, with the most effective context coming from the surrounding sentences. At sentence level, our best performing model achieved a micro-F1 of 0.605, significantly outperforming context-free baselines. At patient level, our best model achieved a micro-F1 of 0.843. DISCUSSION: Our solution can be used to expand the identification of vulnerable older adults with geriatric syndromes. Since functional and social factors are often not captured by diagnosis codes in EHRs, the automatic identification of the geriatric syndrome can reduce disparities by ensuring consistent care across the older adult population.

conclusionEHR free-text can be used to identify vulnerable older adults with a range of geriatric syndromes.

Indexed as

AgedElectronic Health RecordsFrail ElderlyNatural Language ProcessingNeural Networks, ComputerAccidental FallsHealth EquityHumansInternational Classification of DiseasesMobility LimitationModels, StatisticalSocial SupportUrinary Incontinenceclinical notesdeep neural networkelectronic health recordsgeriatric syndromenatural language processingsentence classificationvulnerable geriatric population

Identifiers

PMID31265063
PMCPMC7647225
OpenAlexW2954884457

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.