Evidence map›Paper›PMID 31264965›Full record

ArticleeLife2019

Proteome-wide signatures of function in highly diverged intrinsically disordered regions.

Taraneh Zarin, Bob Strome, Alex N Nguyen Ba, Simon Alberti, Julie D Forman-Kay, Alan M Moses

Abstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 123 papers.

0numbers the graph read from it
0cells of the map it votes in
123citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

123 citing papers in PubMed.

  1. Article
  2. Oral Actinobacteria sense and defend against parasitic epibionts.bioRxiv : the preprint server for biology · 2026
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  19. The Disordered Region of ASXL1 Acts as an Auto-Regulator Through Condensation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  20. Article

63 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Taraneh ZarinDepartment of Cell and Systems Biology, University of Toronto, Toronto, Canada.ORCID https://orcid.org/0000-0003-1253-3843
Bob StromeDepartment of Cell and Systems Biology, University of Toronto, Toronto, Canada.
Alex N Nguyen BaDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, United States.
Simon AlbertiMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.ORCID http://orcid.org/0000-0003-4017-6505
Julie D Forman-KayProgram in Molecular Medicine, Hospital for Sick Children, Toronto, Canada.ORCID https://orcid.org/0000-0001-8265-972X
Alan M MosesDepartment of Cell and Systems Biology, University of Toronto, Toronto, Canada.ORCID https://orcid.org/0000-0003-3118-3121

Funding

CIHR FDN-148375CIHR PJT-148532National Sciences and Engineering Research Council Alexander Graham Bell ScholarshipNational Sciences and Engineering Research Council Discovery GrantNatural Sciences and Engineering Research Council of Canada Alexander Graham Bell ScholarshipNatural Sciences and Engineering Research Council of Canada Discovery GrantNatural Sciences and Engineering Research Council of Canada Postdoctoral Fellowship
6 · The paper itself

Abstract

Intrinsically disordered regions make up a large part of the proteome, but the sequence-to-function relationship in these regions is poorly understood, in part because the primary amino acid sequences of these regions are poorly conserved in alignments. Here we use an evolutionary approach to detect molecular features that are preserved in the amino acid sequences of orthologous intrinsically disordered regions. We find that most disordered regions contain multiple molecular features that are preserved, and we define these as 'evolutionary signatures' of disordered regions. We demonstrate that intrinsically disordered regions with similar evolutionary signatures can rescue function in vivo, and that groups of intrinsically disordered regions with similar evolutionary signatures are strongly enriched for functional annotations and phenotypes. We propose that evolutionary signatures can be used to predict function for many disordered regions from their amino acid sequences.

Indexed as

Amino Acid SequenceDNA RepairEvolution, MolecularGene OntologyIntrinsically Disordered ProteinsMitochondriaMolecular Sequence AnnotationProtein Sorting SignalsProteomeSaccharomyces cerevisiaeIntrinsically Disordered ProteinsProtein Sorting SignalsProteomeclusteringcomputational biologyevolutiongeneticsgenomicsmitochondial targeting signalsmolecular featurespurifying selectionS. cerevisiaesystems biologyunstructured protein

Identifiers

PMID31264965
PMCPMC6634968

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.