Evidence map›Paper›PMID 31264961›Full record

ArticleeLife2019

Functional cross-talk between allosteric effects of activating and inhibiting ligands underlies PKM2 regulation.

Jamie A Macpherson, Alina Theisen, Laura Masino, Louise Fets, Paul C Driscoll, Vesela Encheva, Ambrosius P Snijders, Stephen R Martin, Jens Kleinjung, Perdita E Barran and 2 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. PKM2: A gatekeeper in macrophage metabolic reprogramming.Journal of pharmaceutical analysis · 2026
    Review
  3. Article
  4. Review
  5. Article
  6. Isoform-specific regulation of PKM by acetylation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Jamie A MacphersonCancer Metabolism Laboratory, The Francis Crick Institute, London, United Kingdom.
Alina TheisenMichael Barber Centre for Collaborative Mass Spectrometry, Manchester Institute of Biotechnology, School of Chemistry, University of Manchester, Manchester, United Kingdom.ORCID 0000-0002-0216-8582
Laura MasinoStructural Biology Science Technology Platform, The Francis Crick Institute, London, United Kingdom.
Louise FetsCancer Metabolism Laboratory, The Francis Crick Institute, London, United Kingdom.
Paul C DriscollMetabolomics Science Technology Platform, The Francis Crick Institute, London, United Kingdom.
Vesela EnchevaProteomics Science Technology Platform, The Francis Crick Institute, London, United Kingdom.
Ambrosius P SnijdersProteomics Science Technology Platform, The Francis Crick Institute, London, United Kingdom.
Stephen R MartinStructural Biology Science Technology Platform, The Francis Crick Institute, London, United Kingdom.
Jens KleinjungComputational Biology Science Technology Platform, The Francis Crick Institute, London, United Kingdom.
Perdita E BarranMichael Barber Centre for Collaborative Mass Spectrometry, Manchester Institute of Biotechnology, School of Chemistry, University of Manchester, Manchester, United Kingdom.
Franca FraternaliRandall Centre for Cell and Molecular Biophysics, King's College London, London, United Kingdom.ORCID 0000-0002-3143-6574
Dimitrios AnastasiouCancer Metabolism Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-1269-843X
The Francis Crick Institute · GBKing's College London · GBUniversity of Manchester · GB

Funding

Biotechnology and Biological Sciences Research Council BB/L002655/1Biotechnology and Biological Sciences Research Council BB/L016486/1Cancer Research UK FC001033Medical Research Council FC001033Medical Research Council MC_UP_1202/1Wellcome Trust FC001033
6 · The paper itself

Abstract

Several enzymes can simultaneously interact with multiple intracellular metabolites, however, how the allosteric effects of distinct ligands are integrated to coordinately control enzymatic activity remains poorly understood. We addressed this question using, as a model system, the glycolytic enzyme pyruvate kinase M2 (PKM2). We show that the PKM2 activator fructose 1,6-bisphosphate (FBP) alone promotes tetramerisation and increases PKM2 activity, but addition of the inhibitor L-phenylalanine (Phe) prevents maximal activation of FBP-bound PKM2 tetramers. We developed a method, AlloHubMat, that uses eigenvalue decomposition of mutual information derived from molecular dynamics trajectories to identify residues that mediate FBP-induced allostery. Experimental mutagenesis of these residues identified PKM2 variants in which activation by FBP remains intact but cannot be attenuated by Phe. Our findings reveal residues involved in FBP-induced allostery that enable the integration of allosteric input from Phe and provide a paradigm for the coordinate regulation of enzymatic activity by simultaneous allosteric inputs.

Indexed as

Allosteric RegulationGene Expression Regulation, EnzymologicCarrier ProteinsCell LineDNA Mutational AnalysisEnzyme ActivatorsEnzyme InhibitorsFructosediphosphatesHumansMembrane ProteinsMolecular Dynamics SimulationPhenylalanineProtein MultimerizationSpectrum AnalysisThyroid Hormone-Binding ProteinsThyroid HormonesCarrier ProteinsEnzyme ActivatorsEnzyme Inhibitorsfructose-1,6-diphosphateFructosediphosphatesMembrane ProteinsPhenylalanineThyroid Hormone-Binding ProteinsThyroid Hormonesallosterycomputational biologyenzymologymolecular biophysicsmolecular dynamicsnative mass spectrometrynonestructural biologysystems biology

Identifiers

PMID31264961
PMCPMC6636998
OpenAlexW2954296232

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.