Evidence map›Paper›PMID 31264850›Full record

ArticleBiochemistry2019

Modulating Integrin αIIbβ3 Activity through Mutagenesis of Allosterically Regulated Intersubunit Contacts.

Sophia K Tan, Karen P Fong, Nicholas F Polizzi, Alex Sternisha, Joanna S G Slusky, Kyungchul Yoon, William F DeGrado, Joel S Bennett

Abstract read
In one paragraph

Article in Biochemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Conformational response of αStructure (London, England : 1993) · 2025
    Article
  2. Elucidation of the molecular interactions that enable stable assembly and structural diversity in multicomponent immune receptors.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sophia K TanDepartment of Pharmaceutical Chemistry , University of California, San Francisco , San Francisco , California 94158 , United States.
Karen P FongHematology-Oncology Division , University of Pennsylvania School of Medicine , Philadelphia , Pennsylvania 19104 , United States.
Nicholas F PolizziDepartment of Pharmaceutical Chemistry , University of California, San Francisco , San Francisco , California 94158 , United States.
Alex SternishaHematology-Oncology Division , University of Pennsylvania School of Medicine , Philadelphia , Pennsylvania 19104 , United States.
Joanna S G SluskyDepartment of Molecular Biosciences and Center for Computational Biology , University of Kansas , Lawrence , Kansas 66045 , United States.
Kyungchul YoonHematology-Oncology Division , University of Pennsylvania School of Medicine , Philadelphia , Pennsylvania 19104 , United States.
William F DeGradoDepartment of Pharmaceutical Chemistry , University of California, San Francisco , San Francisco , California 94158 , United States.
Joel S BennettHematology-Oncology Division , University of Pennsylvania School of Medicine , Philadelphia , Pennsylvania 19104 , United States.ORCID 0000-0003-4650-221X

Funding

Subcellular Mechanisms pf Platelet ActivationP01HL040387 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI PONCZ, MORTIMER · 1988 to 2018
$35.5M
STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008284 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KORTEMME, TANJA · 1988 to 2022
$10.1M
Deciphering the relationship between structure, dynamics and function in helical bundle proteinsR35GM122603 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WILLIAM DEGRADO · 2017 to 2026
$7.1M
NHLBI NIH HHS P01 HL040387NIGMS NIH HHS R35 GM122603NIGMS NIH HHS T32 GM008284
6 · The paper itself

Abstract

Integrin αIIbβ3, a transmembrane heterodimer, mediates platelet aggregation when it switches from an inactive to an active ligand-binding conformation following platelet stimulation. Central to regulating αIIbβ3 activity is the interaction between the αIIb and β3 extracellular stalks, which form a tight heterodimer in the inactive state and dissociate in the active state. Here, we demonstrate that alanine replacements of sensitive positions in the heterodimer stalk interface destabilize the inactive conformation sufficiently to cause constitutive αIIbβ3 activation. To determine the structural basis for this effect, we performed a structural bioinformatics analysis and found that perturbing intersubunit contacts with favorable interaction geometry through substitutions to alanine quantitatively accounted for the degree of constitutive αIIbβ3 activation. This mutational study directly assesses the relationship between favorable interaction geometry at mutation-sensitive positions and the functional activity of those mutants, giving rise to a simple model that highlights the importance of interaction geometry in contributing to the stability between protein-protein interactions.

Indexed as

AlanineAllosteric RegulationAnimalsCHO CellsCricetinaeCricetulusHumansMutagenesisPlatelet Glycoprotein GPIIb-IIIa ComplexProtein BindingProtein Structure, SecondaryProtein Structure, TertiaryProtein SubunitsAlaninePlatelet Glycoprotein GPIIb-IIIa ComplexProtein Subunits

Identifiers

PMID31264850
PMCPMC7405930

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.