Evidence map›Paper›PMID 31264365›Full record

ArticleMicrobial biotechnology2019

Fluorescence-based analysis of the intracytoplasmic membranes of type I methanotrophs.

Kyle T Whiddon, Ravindra Gudneppanavar, Theodore J Hammer, Destiny A West, Michael C Konopka

Open access · goldAbstract read
In one paragraph

Article in Microbial biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
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  4. Review
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  6. Review
  7. A methanotrophic bacterium to enable methane removal for climate mitigation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kyle T WhiddonDepartment of Chemistry, The University of Akron, Akron, OH, USA.
Ravindra GudneppanavarDepartment of Chemistry, The University of Akron, Akron, OH, USA.
Theodore J HammerDepartment of Chemistry, The University of Akron, Akron, OH, USA.
Destiny A WestDepartment of Chemistry, The University of Akron, Akron, OH, USA.
Michael C KonopkaDepartment of Chemistry, The University of Akron, Akron, OH, USA.ORCID 0000-0002-2194-6300
University of Akron · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Most methanotrophic bacteria maintain intracytoplasmic membranes which house the methane-oxidizing enzyme, particulate methane monooxygenase. Previous studies have primarily used transmission electron microscopy or cryo-electron microscopy to look at the structure of these membranes or lipid extraction methods to determine the per cent of cell dry weight composed of lipids. We show an alternative approach using lipophilic membrane probes and other fluorescent dyes to assess the extent of intracytoplasmic membrane formation in living cells. This fluorescence method is sensitive enough to show not only the characteristic shift in intracytoplasmic membrane formation that is present when methanotrophs are grown with or without copper, but also differences in intracytoplasmic membrane levels at intermediate copper concentrations. This technique can also be employed to monitor dynamic intracytoplasmic membrane changes in the same cell in real time under changing growth conditions. We anticipate that this approach will be of use to researchers wishing to visualize intracytoplasmic membranes who may not have access to electron microscopes. It will also have the capability to relate membrane changes in individual living cells to other measurements by fluorescence labelling or other single-cell analysis methods.

Indexed as

Bacteriological TechniquesCopperFluorescent DyesIntracellular MembranesMethaneMethylococcaceaeMicroscopy, FluorescenceStaining and LabelingCopperFluorescent DyesMethane

Identifiers

PMID31264365
PMCPMC6680624
OpenAlexW2953790047

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.