Evidence map›Paper›PMID 31264219›Full record

ArticleThe New phytologist2020

Massive postglacial gene flow between European white oaks uncovered genes underlying species barriers.

Thibault Leroy, Quentin Rougemont, Jean-Luc Dupouey, Catherine Bodénès, Céline Lalanne, Caroline Belser, Karine Labadie, Grégoire Le Provost, Jean-Marc Aury, Antoine Kremer and 1 more

Abstract read
In one paragraph

Article in The New phytologist, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. Article
  2. Review
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  7. Article
  8. Response of Pedunculate Oak (Plants (Basel, Switzerland) · 2025
    Review
  9. Article
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  11. Article
  12. Article
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  19. Article
  20. Oak symbolism in the light of genomics.The New phytologist · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Thibault LeroyBIOGECO, INRA, Université de Bordeaux, Cestas, 33610, France.ORCID 0000-0003-2259-9723
Quentin RougemontDépartement de biologie, Institut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Québec, QC, G1V 0A6, Canada.ORCID 0000-0003-2987-3801
Jean-Luc DupoueyINRA Université de Lorraine, UMR 1434 Silva, Route d'Amance, Champenoux, 54280, France.
Catherine BodénèsBIOGECO, INRA, Université de Bordeaux, Cestas, 33610, France.
Céline LalanneBIOGECO, INRA, Université de Bordeaux, Cestas, 33610, France.
Caroline BelserCEA - Institut de Biologie François Jacob, Genoscope, 2 Rue Gaston Crémieux, Evry, 91057, France.ORCID 0000-0002-8108-9910
Karine LabadieCEA - Institut de Biologie François Jacob, Genoscope, 2 Rue Gaston Crémieux, Evry, 91057, France.ORCID 0000-0001-7467-8509
Grégoire Le ProvostBIOGECO, INRA, Université de Bordeaux, Cestas, 33610, France.
Jean-Marc AuryCEA - Institut de Biologie François Jacob, Genoscope, 2 Rue Gaston Crémieux, Evry, 91057, France.ORCID 0000-0003-1718-3010
Antoine KremerBIOGECO, INRA, Université de Bordeaux, Cestas, 33610, France.ORCID 0000-0002-3372-3235
Christophe PlomionBIOGECO, INRA, Université de Bordeaux, Cestas, 33610, France.

Funding

European Research Council 339728
6 · The paper itself

Abstract

Oaks are dominant forest tree species widely distributed across the Northern Hemisphere, where they constitute natural resources of economic, ecological, social and historical value. Hybridisation and adaptive introgression have long been thought to be major drivers of their ecological success. Therefore, the maintenance of species barriers remains a key question, given the extent of interspecific gene flow. In this study, we made use of the tremendous genetic variation among four European white oak species (31 million single nucleotide polymorphisms (SNPs)) to infer the evolutionary history of these species, study patterns of genetic differentiation and identify reproductive barriers. We first analysed the ecological and historical relationships among these species and inferred a long-term strict isolation followed by a recent and extensive postglacial contact using approximate Bayesian computation. Assuming this demographic scenario, we then performed backward simulations to generate the expected distributions of differentiation under neutrality to scan their genomes for reproductive barriers. We finally identified important intrinsic and ecological functions driving the reproductive isolation. We discussed the importance of identifying the genetic basis for the ecological preferences between these oak species and its implications for the renewal of European forests under global warming.

Indexed as

Gene FlowQuercusBayes TheoremGenetic SpeciationHybridization, Geneticapproximate Bayesian computationdemographic inferencesgenome scanintrinsic and ecological barriersreproductive isolationspeciation

Identifiers

PMID31264219
PMCPMC7166129

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.