Evidence map›Paper›PMID 31262025›Full record

ArticleBrain sciences2019

Regional Analysis of the Brain Transcriptome in Mice Bred for High and Low Methamphetamine Consumption.

Robert Hitzemann, Ovidiu D Iancu, Cheryl Reed, Harue Baba, Denesa R Lockwood, Tamara J Phillips

Open access · goldAbstract read
In one paragraph

Article in Brain sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Absence of TAAR1 function increases methamphetamine-induced excitability of dorsal raphe serotonin neurons and drives binge-level methamphetamine intake.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2025
    Article
  3. Article
  4. Article
  5. Robust aversive effects of trace amine-associated receptor 1 activation in mice.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2023
    Article
  6. Article
  7. Differentially Expressed Genes inBiomolecules & therapeutics · 2022
    Article
  8. Article
  9. Review
  10. Article
  11. Confirmation of a CausalFrontiers in psychiatry · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. eLife · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Robert HitzemannDepartment of Behavioral Neuroscience, Oregon Health & Science University, Portland, OR 97239, USA.
Ovidiu D IancuDepartment of Behavioral Neuroscience, Oregon Health & Science University, Portland, OR 97239, USA.
Cheryl ReedDepartment of Behavioral Neuroscience, Oregon Health & Science University, Portland, OR 97239, USA.
Harue BabaDepartment of Behavioral Neuroscience, Oregon Health & Science University, Portland, OR 97239, USA.
Denesa R LockwoodDepartment of Behavioral Neuroscience, Oregon Health & Science University, Portland, OR 97239, USA.
Tamara J PhillipsDepartment of Behavioral Neuroscience, Oregon Health & Science University, Portland, OR 97239, USA. phillipt@ohsu.edu.
Oregon Health & Science University · US

Funding

Translational measures of risk for excessive alcohol consumptionP60AA010760 · NIAAA · OREGON HEALTH & SCIENCE UNIVERSITY · PI Suzanne S. Fei · 2006 to 2026
$34.5M
Traditional Service Core [Translational Service Core (TSC)]P50DA018165 · NIDA · OREGON HEALTH & SCIENCE UNIVERSITY · PI MCCARTY, DENNIS · 2006 to 2016
$13.0M
Genetic Risk for Methamphetamine AbuseU01DA041579 · NIDA · OREGON HEALTH & SCIENCE UNIVERSITY · PI PHILLIPS, TAMARA J. · 2016 to 2020
$2.1M
Genetic Factors Underlying Risk for Methamphetamine Intake and Associated TraitsR01DA046081 · NIDA · OREGON HEALTH & SCIENCE UNIVERSITY · PI PHILLIPS, TAMARA J. · 2018 to 2022
$1.7M
Genetic basis of methamphetamine intakeI01BX002106 · VA · PORTLAND VA MEDICAL CENTER · PI PHILLIPS, TAMARA J. · 2014 to 2022
–
BLRD VA I01 BX002106BLRD VA IK6 BX006342NIAAA NIH HHS P60 AA010760NIDA NIH HHS P50DA018165NIDA NIH HHS R01 DA046081NIDA NIH HHS R01DA046081NIDA NIH HHS U01 DA041579NIDA NIH HHS U01DA041579Oregon Health & Science University-University Shared Resources Funding to the Bioinformatics Pilot Program No grant numberU.S. Department of Veterans Affairs I01BX002106VA Research Career Scientist Program No grant number
6 · The paper itself

Abstract

Transcriptome profiling can broadly characterize drug effects and risk for addiction in the absence of drug exposure. Modern large-scale molecular methods, including RNA-sequencing (RNA-Seq), have been extensively applied to alcohol-related disease traits, but rarely to risk for methamphetamine (MA) addiction. We used RNA-Seq data from selectively bred mice with high or low risk for voluntary MA intake to construct coexpression and cosplicing networks for differential risk. Three brain reward circuitry regions were explored, the nucleus accumbens (NAc), prefrontal cortex (PFC), and ventral midbrain (VMB). With respect to differential gene expression and wiring, the VMB was more strongly affected than either the PFC or NAc. Coexpression network connectivity was higher in the low MA drinking line than in the high MA drinking line in the VMB, oppositely affected in the NAc, and little impacted in the PFC. Gene modules protected from the effects of selection may help to eliminate certain mechanisms from significant involvement in risk for MA intake. One such module was enriched in genes with dopamine-associated annotations. Overall, the data suggest that mitochondrial function and glutamate-mediated synaptic plasticity have key roles in the outcomes of selective breeding for high versus low levels of MA intake.

Indexed as

addictioncoexpression networkconnectivitycosplicing networkgene expressionnucleus accumbensprefrontal cortexRNA-Seqselective breedingventral midbrain

Identifiers

PMID31262025
PMCPMC6681006
OpenAlexW2955786816

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.