Evidence map›Paper›PMID 31259357›Full record

ArticleGenetics and molecular biology

Synthetic and minimalist vectors for Agrobacterium tumefaciens-mediated transformation of fungi.

Luísa Czamanski Nora, Relber Aguiar Gonçales, Leonardo Martins-Santana, Beatriz Henriques Ferreira, Fernando Rodrigues, Rafael Silva-Rocha

Open access · goldAbstract read
In one paragraph

Article in Genetics and molecular biology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Optimizing Transformation Frequency ofJournal of fungi (Basel, Switzerland) · 2021
    Review
  4. Interacting with Hemoglobin:Journal of fungi (Basel, Switzerland) · 2021
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Luísa Czamanski NoraSystems and Synthetic Biology Laboratory, Departmento de Biologia Celular e Molecular Biology e Bioagentes Patogênicos, Faculdade de Medicina de Ribeião Preto, Universidade de São Paulo, Ribeirão Preto, SP, Brazil.
Relber Aguiar GonçalesImmunochemistry and Glycobiology Laboratory, Departmento de Biologia Celular e Molecular Biology e Bioagentes Patogênicos, Faculdade de Medicina de Ribeião Preto, Universidade de São Paulo, Ribeirão Preto, SP, Brazil.
Leonardo Martins-SantanaSystems and Synthetic Biology Laboratory, Departmento de Biologia Celular e Molecular Biology e Bioagentes Patogênicos, Faculdade de Medicina de Ribeião Preto, Universidade de São Paulo, Ribeirão Preto, SP, Brazil.
Beatriz Henriques FerreiraLife and Health Sciences Research Institute (ICVS), School of Health Sciences, University of Minho, Braga, Portugal.
Fernando RodriguesLife and Health Sciences Research Institute (ICVS), School of Health Sciences, University of Minho, Braga, Portugal.
Rafael Silva-RochaSystems and Synthetic Biology Laboratory, Departmento de Biologia Celular e Molecular Biology e Bioagentes Patogênicos, Faculdade de Medicina de Ribeião Preto, Universidade de São Paulo, Ribeirão Preto, SP, Brazil.ORCID http://orcid.org/0000-0001-6319-631X
Universidade de São Paulo · BRUniversity of Minho · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present a collection of minimalist binary vectors for transformation through ATMT applicable to several fungi species. pLUO plasmid binary vectors consist of a reporter module containing fluorescent proteins, mCherry or eGFP, flanked by a multiple cloning site and a transcription terminator site. They also present a synthetic gene allowing resistance to Hygromicin B flanked by alternate promoters, one for yeast and another for filamentous fungi. Left and right borders were added for Agrobacterium tumefaciens recognition, and a minimal broad-host range RK2 replication origin. Transformation was validated in the pathogenic fungus Paracoccidioides lutzii. Hence, we developed an efficient and reliable molecular tool for fungal transformation: minimalist, synthetic, modular, and available in four different versions, and these can still be readily modified using a few primers and few cloning steps.

Identifiers

PMID31259357
PMCPMC6726164
OpenAlexW2952905939

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.