Evidence map›Paper›PMID 31259027›Full record

ArticleAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science2019

An exploration of ontology-based EMR data abstraction for diabetic kidney disease prediction.

Xing Song, Lemuel R Waitman, Yong Hu, Alan S L Yu, David Robbins, Mei Liu

Open access · greenAbstract read
In one paragraph

Article in AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Xing SongUniversity of Kansas Medical Center, Department of Internal Medicine, Division of Medical Informatics, Kansas City, KS, USA.
Lemuel R WaitmanUniversity of Kansas Medical Center, Department of Internal Medicine, Division of Medical Informatics, Kansas City, KS, USA.
Yong HuJinan University, Big Data Decision Institute, Guangzhou, PRC.
Alan S L YuUniversity of Kansas Medical Center, Division of Nephrology and Hypertension and the Kidney Institute, Kansas City, KS, USA.
David RobbinsUniversity of Kansas Medical Center, Diabetes Institute, Kansas City, KS, USA.
Mei LiuUniversity of Kansas Medical Center, Department of Internal Medicine, Division of Medical Informatics, Kansas City, KS, USA.
University of Kansas Medical Center · USJinan University · CN

Funding

RADx-UP: Improving the Response of Local Urban and Rural Communities to Disparities in Covid-19 TestingUL1TR002366 · NCATS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Mario Castro, JAMES STEVEN LEEDER · 2017 to 2026
$44.3M
Using Integrated Omics to Identify Dysfunctional Genetic Mechanisms Influencing Schizophrenia and Sleep DisturbancesP20GM130423 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI ANDREW K. GODWIN · 2019 to 2026
$21.5M
NCATS NIH HHS UL1 TR002366
6 · The paper itself

Abstract

Diabetic Kidney Disease (DKD) is a critical and morbid complication of diabetes and the leading cause of chronic kidney disease in the developed world. Electronic medical records (EMRs) hold promise for supporting clinical decision-making with its nationwide adoption as well as rich information characterizing patients' health care experience. However, few retrospective studies have fully utilized the EMR data to model DKD risk. This study examines the effectiveness of an unbiased data driven approach in identifying potential DKD patients in 6 months prior to onset by utilizing EMR on a broader spectrum. Meanwhile, we evaluate how different levels of data granularity of Medications and Diagnoses observations would affect prediction performance and knowledge discovery. The experimental results suggest that different data granularity may not necessarily influence the prediction accuracy, but it would dramatically change the internal structure of the predictive models.

Indexed as

Data RepresentationDKDEMR ontology, Gradient Boosting MachinePredictive Modeling

Identifiers

PMID31259027
PMCPMC6568123
OpenAlexW3004344903

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.