Evidence map›Paper›PMID 31258990›Full record

ArticleAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science2019

Extending i2b2 into a framework for semantic abstraction of EHR to facilitate rapid development and portability of Health IT applications.

Kavishwar B Wagholikar, Layne Ainsworth, Vishal P Vernekar, Ameet Pathak, Corey Glynn, David Zelle, Akshay Zagade, Neelima Karipineni, Christopher D Herrick, Marian McPartlin and 11 more

Abstract read
In one paragraph

Article in AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Kavishwar B WagholikarHarvard Medical School, Boston, MA.
Layne AinsworthPartners Healthcare Boston, MA.
Vishal P VernekarPersistent Systems, Pune, India.
Ameet PathakPersistent Systems, Pune, India.
Corey GlynnPartners Healthcare Boston, MA.
David ZellePartners Healthcare Boston, MA.
Akshay ZagadePersistent Systems, Pune, India.
Neelima KaripineniHarvard Medical School, Boston, MA.
Christopher D HerrickPartners Healthcare Boston, MA.
Marian McPartlinHarvard Medical School, Boston, MA.
Tiffany V BuiHarvard Medical School, Boston, MA.
Mike MendisPartners Healthcare Boston, MA.
Jeffery KlannHarvard Medical School, Boston, MA.
Michael OatesPartners Healthcare Boston, MA.
William GordonBrigham and Women's Hospital, Boston, MA.
Christopher CannonHarvard Medical School, Boston, MA.
Rahul PatelPersistent Systems, Pune, India.
Samuel J AronsonPartners Healthcare Boston, MA.
Calum A MacRaeHarvard Medical School, Boston, MA.
Benjamin M SciricaHarvard Medical School, Boston, MA.
Shawn N MurphyHarvard Medical School, Boston, MA.

Funding

Developing i2b2 into a Health Innovation Platform for Clinical Decision Support in the Genomics EraR01HG009174 · NHGRI · MASSACHUSETTS GENERAL HOSPITAL · PI ARONSON, SAMUEL JEFFREY, MACRAE, CALUM A. · 2016 to 2019
$2.9M
A Framework to Enhance Decision Support by Invoking NLP: Methods and ApplicationsR00LM011575 · NLM · MASSACHUSETTS GENERAL HOSPITAL · PI WAGHOLIKAR, KAVISHWAR B. · 2016 to 2018
$749k
A Framework to Enhance Decision Support by Invoking NLP: Methods and ApplicationsK99LM011575 · NLM · MAYO CLINIC ROCHESTER · PI WAGHOLIKAR, KAVISHWAR B. · 2014 to 2015
$179k
NHGRI NIH HHS R01 HG009174NLM NIH HHS K99 LM011575NLM NIH HHS R00 LM011575
6 · The paper itself

Abstract

The wide gap between a care provider's conceptualization of electronic health record (EHR) and the structures for electronic health record (EHR) data storage and transmission, presents a multitude of obstacles for development of innovative Health IT applications. While developers model the EHR view of the clinicians at one end, they work with a different data view to construct health IT applications. Although there has been considerable progress to bridge this gap by evolution of developer friendly standards and tools for terminology mapping and data warehousing, there is a need for a simplified framework to facilitate development of interoperable applications. To this end, we propose a framework for creating a layer of semantic abstraction on the EHR and describe preliminary work on the implementation of this framework for management of hyperlipidemia and hypertension. Our goal is to facilitate the rapid development and portability of Health IT applications.

Identifiers

PMID31258990
PMCPMC6568124

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.