Evidence map›Paper›PMID 31255287›Full record

ArticleBiochemical and biophysical research communications2019

Attenuation of PRRX2 and HEY2 enables efficient conversion of adult human skin fibroblasts to neurons.

Hanqin Li, Houbo Jiang, Xinzhen Yin, Jonathan E Bard, Baorong Zhang, Jian Feng

Open access · greenAbstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Spinal-Specific Super Enhancer in Neuropathic Pain.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  8. Article
  9. CircLRFN5 inhibits the progression of glioblastoma via PRRX2/GCH1 mediated ferroptosis.Journal of experimental & clinical cancer research : CR · 2022
    Article
  10. Article
  11. Generation of Induced Dopaminergic Neurons from Human Fetal Fibroblasts.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  12. Article
  13. Toward Generating Subtype-Specific Mesencephalic Dopaminergic NeuronsFrontiers in cell and developmental biology · 2020
    Review
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Hanqin LiDepartment of Physiology and Biophysics, State University of New York at Buffalo, Buffalo, NY, 14203, USA; Veterans Affairs Western New York Healthcare System, Buffalo, NY, 14215, USA.
Houbo JiangDepartment of Physiology and Biophysics, State University of New York at Buffalo, Buffalo, NY, 14203, USA; Veterans Affairs Western New York Healthcare System, Buffalo, NY, 14215, USA.
Xinzhen YinDepartment of Physiology and Biophysics, State University of New York at Buffalo, Buffalo, NY, 14203, USA; Department of Neurology, Second Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, China.
Jonathan E BardGenomics and Bioinformatics Core, State University of New York at Buffalo, Buffalo, NY, 14203, USA.
Baorong ZhangDepartment of Neurology, Second Affiliated Hospital, College of Medicine, Zhejiang University, Hangzhou, China.
Jian FengDepartment of Physiology and Biophysics, State University of New York at Buffalo, Buffalo, NY, 14203, USA; Veterans Affairs Western New York Healthcare System, Buffalo, NY, 14215, USA. Electronic address: jianfeng@buffalo.edu.
Second Affiliated Hospital of Zhejiang University · CNUniversity at Buffalo, State University of New York · USVA Western New York Healthcare System · US

Funding

A Novel Epigenetic Mechanism for Alzheimer's DiseaseR01AG056060 · NIA · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI YAN, ZHEN · 2017 to 2021
$2.2M
Functions of parkin in Parkinson’s diseaseR01NS102148 · NINDS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI FENG, JIAN · 2018 to 2021
$1.8M
Functions of parkin in Parkinson’s diseaseR56NS102148 · NINDS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI FENG, JIAN · 2017 to 2017
$399k
Kinetic Barriers of TransdifferentiationI01BX002452 · VA · VA WESTERN NEW YORK HEALTHCARE SYSTEM · PI FENG, JIAN · 2014 to 2021
–
The Interaction of parkin and environmental toxins in Parkinson’s diseaseI01BX003831 · VA · VA WESTERN NEW YORK HEALTHCARE SYSTEM · PI FENG, JIAN · 2018 to 2021
–
BLRD VA I01 BX002452BLRD VA I01 BX003831NIA NIH HHS R01 AG056060NINDS NIH HHS R01 NS102148NINDS NIH HHS R56 NS102148
6 · The paper itself

Abstract

The direct conversion of accessible cells such as human fibroblasts to inaccessible cells, particularly neurons, opens up many opportunities for using the human model system to study diseases and discover therapies. Previous studies have indicated that the neuronal conversion of adult human skin fibroblasts is much harder than that for human lung fibroblasts, which are used in many experiments. Here we formally report this differential plasticity of human skin versus lung fibroblasts in their transdifferentiation to induced neurons. Using RNAseq of isogenic and non-isogenic pairs of human skin and lung fibroblasts at different days in their conversion to neurons, we found that several master regulators (TWIST1, TWIST2, PRRX1 and PRRX2) in the fibroblast Gene Regulatory Network were significantly downregulated in lung fibroblasts, but not in skin fibroblasts. By knocking down each of these genes and other genes that suppress the neural fate, such as REST, HES1 and HEY2, we found that the combined attenuation of HEY2 and PRRX2 significantly enhanced the transdifferentiation of human skin fibroblasts induced by ASCL1 and p53 shRNA. The new method, which overexpressed ASCL1 and knocked down p53, HEY2 and PRRX2 (ApH2P2), enabled the efficient transdifferentiation of adult human skin fibroblasts to MAP2

Indexed as

AdultBasic Helix-Loop-Helix ProteinsCell TransdifferentiationCellular ReprogrammingFibroblastsGene Expression RegulationGene Regulatory NetworksHomeodomain ProteinsHumansLungNeuronsNuclear ProteinsOrgan SpecificityPrimary Cell CultureRE1-Silencing Transcription FactorRepressor ProteinsASCL1 protein, humanBasic Helix-Loop-Helix ProteinsHES1 protein, humanHEY2 protein, humanHomeodomain ProteinsNuclear ProteinsPRRX1 protein, humanPRRX2 protein, humanRE1-Silencing Transcription FactorRepressor ProteinsRNA, Small InterferingTranscription Factor HES-1Tumor Suppressor Protein p53TWIST1 protein, humanTWIST2 protein, humanTwist-Related Protein 1Direct conversionHEY2Induced neuronsLung fibroblastsPRRX2Skin fibroblastsTransdifferentiation

Identifiers

PMID31255287
PMCPMC6646072
OpenAlexW2955863452

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.