Evidence map›Paper›PMID 31254045›Full record

ArticleCellular and molecular life sciences : CMLS2020

Targeted deep sequencing revealed variants in cell-free DNA of hormone receptor-positive metastatic breast cancer patients.

Corinna Keup, Karim Benyaa, Siegfried Hauch, Markus Sprenger-Haussels, Mitra Tewes, Pawel Mach, Ann-Kathrin Bittner, Rainer Kimmig, Peter Hahn, Sabine Kasimir-Bauer

Open access · hybridAbstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 45 citations in OpenAlex.

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  20. Impact of Preanalytical and Analytical Methods on Cell-Free DNA Diagnostics.Frontiers in cell and developmental biology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Corinna KeupDepartment of Gynecology and Obstetrics, University Hospital of Essen, Essen, Germany. Corinna.Keup@uk-essen.de.ORCID http://orcid.org/0000-0003-3525-7511
Karim BenyaaQIAGEN GmbH, Hilden, Germany.
Siegfried HauchQIAGEN GmbH, Hilden, Germany.
Markus Sprenger-HausselsQIAGEN GmbH, Hilden, Germany.
Mitra TewesDepartment of Medical Oncology, University Hospital of Essen, Essen, Germany.
Pawel MachDepartment of Gynecology and Obstetrics, University Hospital of Essen, Essen, Germany.
Ann-Kathrin BittnerDepartment of Gynecology and Obstetrics, University Hospital of Essen, Essen, Germany.
Rainer KimmigDepartment of Gynecology and Obstetrics, University Hospital of Essen, Essen, Germany.
Peter HahnQIAGEN GmbH, Hilden, Germany.
Sabine Kasimir-BauerDepartment of Gynecology and Obstetrics, University Hospital of Essen, Essen, Germany.
Essen University Hospital · DEQiagen (Germany) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cell-free DNA (cfDNA) is described to mirror intratumoral heterogeneity and gives insight about clonal evolution for improved therapeutic decisions. We sequenced cfDNA of a hormone receptor-positive, HER2-negative metastatic breast cancer (MBC) cohort with a high coverage to examine the prevalence and relevance of any detected variant. cfDNA of 44 MBC patients was isolated, followed by library construction using a customized targeted DNA panel with integrated unique molecular indices analyzing AKT1, AR, BRCA1, BRCA2, EGFR, ERCC4, ERBB2, ERBB3, ESR1, FGFR1, KRAS, MUC16, PIK3CA, PIK3R1, PTEN, PTGFR, and TGFB1. CfDNA was sequenced on the NextSeq

Indexed as

AllelesBiomarkers, TumorBRCA1 ProteinBRCA2 ProteinBreast NeoplasmsCell-Free Nucleic AcidsClass I Phosphatidylinositol 3-KinasesEstrogen Receptor alphaFemaleGenetic VariationHumansReceptors, Cell SurfaceBiomarkers, TumorBRCA1 ProteinBRCA2 ProteinCell-Free Nucleic AcidsClass I Phosphatidylinositol 3-KinasesEstrogen Receptor alphaReceptors, Cell SurfaceccfDNACirculating tumor DNActDNALiquid biopsyMetastatic breast cancerMutationNext generation sequencingNGSSNPTherapy stratificationUnique molecular indices

Identifiers

PMID31254045
PMCPMC7010653
OpenAlexW2954242274

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.