Evidence map›Paper›PMID 31253759›Full record

ArticleNature communications2019

A protein complex required for polar growth of rhizobial infection threads.

Cheng-Wu Liu, Andrew Breakspear, Nicola Stacey, Kim Findlay, Jin Nakashima, Karunakaran Ramakrishnan, Miaoxia Liu, Fang Xie, Gabriella Endre, Fernanda de Carvalho-Niebel and 4 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
18.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 109 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Control of Rhizobia Endosymbiosis by Coupling ER Expansion with Enhanced UPR.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  11. Review
  12. Article
  13. Review
  14. Article
  15. Signaling in Legume-Rhizobia Symbiosis.International journal of molecular sciences · 2023
    Review
  16. Article
  17. Article
  18. Article
  19. Genome-Wide Identification and Comparative Analysis ofInternational journal of molecular sciences · 2023
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 5 countries.

Cheng-Wu LiuCell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0002-6650-6245
Andrew BreakspearCell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.
Nicola StaceyCell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.
Kim FindlayCell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.
Jin NakashimaNoble Research Institute, 2510 Sam Noble Parkway, Ardmore, OK, 73401, USA.
Karunakaran RamakrishnanCell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.
Miaoxia LiuNational Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular and Plant Sciences, Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, 200032, Shanghai, China.
Fang XieNational Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular and Plant Sciences, Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, 200032, Shanghai, China.
Gabriella EndreInstitute of Plant Biology, Biological Research Centre, Szeged, 6726, Hungary.
Fernanda de Carvalho-NiebelLIPM, Université de Toulouse, INRA, CNRS, 31326, Castanet-Tolosan, France.ORCID http://orcid.org/0000-0002-5596-9420
Giles E D OldroydSainsbury Laboratory, University of Cambridge, 47 Bateman Street, Cambridge, CB2 1LR, UK.
Michael K UdvardiNoble Research Institute, 2510 Sam Noble Parkway, Ardmore, OK, 73401, USA.
Joëlle FournierLIPM, Université de Toulouse, INRA, CNRS, 31326, Castanet-Tolosan, France. joelle.fournier@inra.fr.
Jeremy D MurrayCell and Developmental Biology, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK. jeremy.murray@jic.ac.uk.ORCID http://orcid.org/0000-0003-3000-9199
John Innes Centre · GBCentre National de la Recherche Scientifique · FRChinese Academy of Sciences · CNNoble Research Institute · USHUN-REN Szegedi Biológiai Kutatóközpont · HUUniversity of Cambridge · GB

Funding

Agence Nationale de la Recherche (French National Research Agency) TULIP ANR-10-LABX-41 (TULIP)/COME-IN ANR-14-CE35-0007-01RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/L010305/1
6 · The paper itself

Abstract

During root nodule symbiosis, intracellular accommodation of rhizobia by legumes is a prerequisite for nitrogen fixation. For many legumes, rhizobial colonization initiates in root hairs through transcellular infection threads. In Medicago truncatula, VAPYRIN (VPY) and a putative E3 ligase LUMPY INFECTIONS (LIN) are required for infection thread development but their cellular and molecular roles are obscure. Here we show that LIN and its homolog LIN-LIKE interact with VPY and VPY-LIKE in a subcellular complex localized to puncta both at the tip of the growing infection thread and at the nuclear periphery in root hairs and that the punctate accumulation of VPY is positively regulated by LIN. We also show that an otherwise nuclear and cytoplasmic exocyst subunit, EXO70H4, systematically co-localizes with VPY and LIN during rhizobial infection. Genetic analysis shows that defective rhizobial infection in exo70h4 is similar to that in vpy and lin. Our results indicate that VPY, LIN and EXO70H4 are part of the symbiosis-specific machinery required for polar growth of infection threads.

Indexed as

AgrobacteriumGene Expression Regulation, PlantMedicago truncatulaPlant ProteinsPlant Root NodulationPlant RootsSinorhizobium melilotiSymbiosisTwo-Hybrid System TechniquesPlant Proteins

Identifiers

PMID31253759
PMCPMC6599036
OpenAlexW2955334678

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.