Evidence map›Paper›PMID 31253148›Full record

ArticleMicrobial cell factories2019

A kinetic metabolic study of lipid production in Chlorella protothecoides under heterotrophic condition.

Xiaojie Ren, Jean-Sébastien Deschênes, Réjean Tremblay, Sabine Peres, Mario Jolicoeur

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 3 countries.

Xiaojie RenColin Ratledge Center for Microbial Lipids, School of Agriculture Engineering and Food Science, Shandong University of Technology, Zibo, China.
Jean-Sébastien DeschênesUniversité du Québec à Rimouski, 310 allée des Ursulines, Rimouski, QC, G5L 3A1, Canada.
Réjean TremblayUniversité du Québec à Rimouski, 310 allée des Ursulines, Rimouski, QC, G5L 3A1, Canada.
Sabine PeresLRI, Université Paris-Sud, CNRS, Université Paris-Saclay, 91405, Orsay, France.
Mario JolicoeurResearch Laboratory in Applied Metabolic Engineering, Department of Chemical Engineering, École Polytechnique de Montreal, Centre-ville Station, P.O. Box 6079, Montreal, H3C 3A7, QC, Canada. mario.jolicoeur@polymtl.ca.
Université du Québec à Rimouski · CAPolytechnique Montréal · CAShandong University of Technology · CNUniversité Paris-Sud · FR

Funding

Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada 093865-RGPIN2014-04329China Postdoctoral Science Foundation 2019M650167Fonds Québécois de la Recherche sur la Nature et les Technologies RS-171172Shandong Provincial Natural Science Foundation, China ZR2019BC099
6 · The paper itself

Abstract

backgroundMicroalgae have been proposed as potential platform to produce lipid-derived products, such as biofuels. Knowledge on the intracellular carbon flow distribution may identify key metabolic processes during lipid synthesis thus refining culture/genetic strategies to maximize cell lipid productivity. A kinetic metabolic model simulating cell metabolic behavior and lipid production was first applied in the microalgae platform Chlorella protothecoides under heterotrophic condition. It combines both physiology and flux information in a kinetic approach. Cell nutrition, growth, lipid production and almost 30 metabolic intermediates covering central carbon metabolism were included and simulated.

resultsModel simulations were shown to adequately agree with experimental data, which is suggesting that the proposed model copes with Chlorella protothecoides cells' biology. The dynamic metabolic flux analysis using the model showed a reversible starch flux from accumulation to decomposing when glucose reached depletion, while net lipid flux shows a quasi-constant rate. The sensitive flux parameters on starch and lipid metabolism suggested that starch synthesis is the major competing pathway that affects lipid accumulation in C. protothecoides. Flux analysis also demonstrated that high lipid yield under heterotrophic condition is accompanied with high lipid flux and low TCA activity. Meanwhile, the dynamic flux distribution also suggests a relatively constant ratio of glucose distributed to biomass, lipid, starch, nucleotides as well as pentose phosphate pathway.

conclusionThe model described not only experimental data, but also unraveled intracellular carbon flow distribution and identify key metabolic processes during lipid synthesis. Most of the metabolic kinetics also showed statistical significance for metabolic mechanism. Therefore, this study unravels the mechanisms of the glucose impact on the dynamic carbon flux distribution, thus improving our understanding of the links between carbon fluxes and lipid metabolism in C. protothecoides.

Indexed as

CarbonChlorellaGlucoseHeterotrophic ProcessesKineticsLipidsMetabolic Flux AnalysisMicroalgaePentose Phosphate PathwayStarchCarbonGlucoseLipidsStarchCentral carbon metabolismChlorella protothecoidesDynamic flux analysisKinetic modelMetabolic modellingMicroalgae

Identifiers

PMID31253148
PMCPMC6598345
OpenAlexW2953581947

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.