Evidence map›Paper›PMID 31251806›Full record

ArticleNucleic acids research2019

Symmetric activity of DNA polymerases at and recruitment of exonuclease ExoR and of PolA to the Bacillus subtilis replication forks.

Rogelio Hernández-Tamayo, Luis M Oviedo-Bocanegra, Georg Fritz, Peter L Graumann

Abstract read
In one paragraph

Article in Nucleic acids research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Article
  3. DNA polymerase I: structure, activity, and function in bacterial DNA replication and repair.Critical reviews in biochemistry and molecular biology · 2026
    Review
  4. "ThebioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. International journal of molecular sciences · 2025
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. Oxidative stress drives mutagenesis through transcription-coupled repair in bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  15. Article
  16. Article
  17. The Replicative DnaE Polymerase ofLife (Basel, Switzerland) · 2023
    Article
  18. Article
  19. Review
  20. A Single Nucleotide Change in theApplied and environmental microbiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Rogelio Hernández-TamayoSYNMIKRO, LOEWE Center for Synthetic Microbiology, Hans-Meerwein-Straße 6, 35043 Marburg, Germany.
Luis M Oviedo-BocanegraSYNMIKRO, LOEWE Center for Synthetic Microbiology, Hans-Meerwein-Straße 6, 35043 Marburg, Germany.
Georg FritzSYNMIKRO, LOEWE Center for Synthetic Microbiology, Hans-Meerwein-Straße 6, 35043 Marburg, Germany.
Peter L GraumannSYNMIKRO, LOEWE Center for Synthetic Microbiology, Hans-Meerwein-Straße 6, 35043 Marburg, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA replication forks are intrinsically asymmetric and may arrest during the cell cycle upon encountering modifications in the DNA. We have studied real time dynamics of three DNA polymerases and an exonuclease at a single molecule level in the bacterium Bacillus subtilis. PolC and DnaE work in a symmetric manner and show similar dwell times. After addition of DNA damage, their static fractions and dwell times decreased, in agreement with increased re-establishment of replication forks. Only a minor fraction of replication forks showed a loss of active polymerases, indicating relatively robust activity during DNA repair. Conversely, PolA, homolog of polymerase I and exonuclease ExoR were rarely present at forks during unperturbed replication but were recruited to replications forks after induction of DNA damage. Protein dynamics of PolA or ExoR were altered in the absence of each other during exponential growth and during DNA repair, indicating overlapping functions. Purified ExoR displayed exonuclease activity and preferentially bound to DNA having 5' overhangs in vitro. Our analyses support the idea that two replicative DNA polymerases work together at the lagging strand whilst only PolC acts at the leading strand, and that PolA and ExoR perform inducible functions at replication forks during DNA repair.

Indexed as

DNA RepairGene Expression Regulation, BacterialBacillus subtilisBacterial ProteinsCloning, MolecularDNA, BacterialDNA DamageDNA-Directed DNA PolymeraseDNA Polymerase IDNA Polymerase IIIDNA ReplicationEscherichia coliExodeoxyribonucleasesGene ExpressionGenetic VectorsRecombinant ProteinsBacterial ProteinsDNA, BacterialDNA-Directed DNA PolymeraseDNA Polymerase IDNA Polymerase IIIDNA polymerase III, alpha subunitExodeoxyribonucleasesPolC protein, bacteriaRecombinant Proteins

Identifiers

PMID31251806
PMCPMC6895272

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.