ArticlePloS one2019
S3CMTF: Fast, accurate, and scalable method for incomplete coupled matrix-tensor factorization.
Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.
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Who cites it
5 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Spectroscopic technologies and data fusion: Applications for the dairy industry.Frontiers in nutrition · 2022Pooled it
- Article
- Tensor-structured decomposition improves systems serology analysis.Molecular systems biology · 2021Article
- TASTE: Temporal and Static Tensor Factorization for Phenotyping Electronic Health Records.Proceedings of the ACM Conference on Health, Inference, and Learning · 2020Article
- GIFT: Guided and Interpretable Factorization for Tensors with an application to large-scale multi-platform cancer analysis.Bioinformatics (Oxford, England) · 2018Article
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Authors and funding
3 authors.
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No grant is acknowledged in the PubMed record.
Abstract
How can we extract hidden relations from a tensor and a matrix data simultaneously in a fast, accurate, and scalable way? Coupled matrix-tensor factorization (CMTF) is an important tool for this purpose. Designing an accurate and efficient CMTF method has become more crucial as the size and dimension of real-world data are growing explosively. However, existing methods for CMTF suffer from lack of accuracy, slow running time, and limited scalability. In this paper, we propose S3CMTF, a fast, accurate, and scalable CMTF method. In contrast to previous methods which do not handle large sparse tensors and are not parallelizable, S3CMTF provides parallel sparse CMTF by carefully deriving gradient update rules. S3CMTF asynchronously updates partial gradients without expensive locking. We show that our method is guaranteed to converge to a quality solution theoretically and empirically. S3CMTF further boosts the performance by carefully storing intermediate computation and reusing them. We theoretically and empirically show that S3CMTF is the fastest, outperforming existing methods. Experimental results show that S3CMTF is up to 930× faster than existing methods while providing the best accuracy. S3CMTF shows linear scalability on the number of data entries and the number of cores. In addition, we apply S3CMTF to Yelp rating tensor data coupled with 3 additional matrices to discover interesting patterns.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.