Evidence map›Paper›PMID 31250400›Full record

ArticleJournal of microbiology (Seoul, Korea)2019

Whole genome analysis of Aspergillus sojae SMF 134 supports its merits as a starter for soybean fermentation.

Kang Uk Kim, Kyung Min Kim, Yong-Ho Choi, Byung-Serk Hurh, Inhyung Lee

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of microbiology (Seoul, Korea), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Whole-genome sequence of anMicrobiology resource announcements · 2023
    Article
  3. Article
  4. Are CurrentMycobiology · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Kang Uk KimDepartment of Bio and Fermentation Convergence Technology, BK21 PLUS Project, Kookmin University, Seoul, 02707, Republic of Korea.
Kyung Min KimDepartment of Bio and Fermentation Convergence Technology, BK21 PLUS Project, Kookmin University, Seoul, 02707, Republic of Korea.
Yong-Ho ChoiSempio Fermentation Research Center, Sempio Foods Company, Cheongju, 28156, Republic of Korea.
Byung-Serk HurhSempio Fermentation Research Center, Sempio Foods Company, Cheongju, 28156, Republic of Korea.
Inhyung LeeDepartment of Bio and Fermentation Convergence Technology, BK21 PLUS Project, Kookmin University, Seoul, 02707, Republic of Korea. leei@kookmin.ac.kr.
Kookmin University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aspergillus sojae is a koji (starter) mold that has been applied for food fermentation in Asia. The whole genome of A. sojae SMF 134, which was isolated from meju (Korean soybean fermented brick), was analyzed at the genomic level to evaluate its potential as a starter for soybean fermentation. The genome size was 40.1 Mbp, which was expected to be composed of eight chromosomes with 13,748 ORFs. Strain SMF 134 had a total of 151 protease genes, among which two more leucine aminopeptidase (lap) genes were found in addition to the previously known lap 1, and three γ-glutamyltranspeptidase (ggt) genes were newly identified. Such genomic characteristics of SMF 134 with many protease and flavor-related (lap and ggt) genes support its merits as a starter for soybean fermentation. In addition, this first complete genome of A. sojae will allow for further genetic studies to better understand the production of various enzymes, including proteases, LAPs, and GGTs, as well as other characteristics as a starter mold for soybean fermentation.

Indexed as

Genome, FungalAspergillusFermentationFungal ProteinsGlycine maxLeucyl AminopeptidasePeptide HydrolasesFungal ProteinsLeucyl AminopeptidasePeptide HydrolasesAspergillus sojaegenome sequenceproteasesoybean fermentationstarter mold

Identifiers

PMID31250400
OpenAlexW2954828430

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.