Evidence map›Paper›PMID 31250362›Full record

ArticleFolia microbiologica2020

Study of in vitro interaction between Fusarium verticillioides and Streptomyces sp. using metabolomics.

Phuong-Anh Nguyen, Caroline Strub, Marie Lagrée, Justine Bertrand-Michel, Sabine Schorr-Galindo, Angélique Fontana

Abstract read
PubMed Publisher
In one paragraph

Article in Folia microbiologica, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Biocontrol of Mycotoxigenic Fungi by Actinobacteria.Journal of fungi (Basel, Switzerland) · 2024
    Review
  3. Antagonistic Activity ofPlants (Basel, Switzerland) · 2023
    Article
  4. Review
  5. Review
  6. Application of Metabolomics in Fungal Research.Molecules (Basel, Switzerland) · 2022
    Review
  7. Frontiers in plant science · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Phuong-Anh NguyenUMR QualiSud (Université de Montpellier), Univ. Montpellier, CIRAD, Montpellier SupAgro, Univ d'Avignon, Univ de La Réunion, 34095, Montpellier Cedex 5, France.
Caroline StrubUMR QualiSud (Université de Montpellier), Univ. Montpellier, CIRAD, Montpellier SupAgro, Univ d'Avignon, Univ de La Réunion, 34095, Montpellier Cedex 5, France. caroline.strub@umontpellier.fr.ORCID http://orcid.org/0000-0001-9361-9715
Marie LagréeUniversité Clermont Auvergne-INRA, MétaboHUB/Plateforme d'exploration du métabolisme, 63000, Clermont-Ferrand, France.
Justine Bertrand-MichelPlateforme MétaToul-Lipidomique, Inserm 1048, 31432, Toulouse Cedex 4, France.
Sabine Schorr-GalindoUMR QualiSud (Université de Montpellier), Univ. Montpellier, CIRAD, Montpellier SupAgro, Univ d'Avignon, Univ de La Réunion, 34095, Montpellier Cedex 5, France.
Angélique FontanaUMR QualiSud (Université de Montpellier), Univ. Montpellier, CIRAD, Montpellier SupAgro, Univ d'Avignon, Univ de La Réunion, 34095, Montpellier Cedex 5, France.
Centre de Coopération Internationale en Recherche Agronomique pour le Développement · FRCentre National de la Recherche Scientifique · FRInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Streptomyces sp. strain AV05 isolated from an organic amendment was found to impact both growth and fumonisin production of Fusarium verticillioides during in vitro direct confrontation. In order to investigate the interactions between the Streptomyces sp. strain AV05 and F. verticillioides, a metabolomic approach was used. The study of the endometabolomes of the microorganisms was carried out in two different conditions: the microorganisms were cultivated alone or in confrontation. The aim of this study was to examine the modifications of the endometabolome of F. verticillioides in confrontation with the Streptomyces strain. The metabolites involved in these modifications were identified using 2D NMR. Many metabolites were found to be overproduced in confrontation assays with the Streptomyces strain, notably 16 proteinogenic amino acids, inosine, and uridine. This suggested that fungal metabolic pathways such as protein synthesis have been affected due to interaction. Thus, metabolomic studies, as well as proteomics or transcriptomics, are useful for deciphering the mechanisms of interactions between biological control agents and mycotoxigenic fungi. This comprehension is one of the key elements of the improvement of the selection and use of antagonistic agents.

Indexed as

Bacterial ProteinsFungal ProteinsFusariumMetabolic Networks and PathwaysMetabolomicsStreptomycesBacterial ProteinsFungal Proteins

Identifiers

PMID31250362
OpenAlexW2953447911

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.