Evidence map›Paper›PMID 31250318›Full record

ArticleJournal of the American Society for Mass Spectrometry2019

Data Processing Pipeline for Lipid Profiling of Carotid Atherosclerotic Plaque with Mass Spectrometry Imaging.

Mirjam Visscher, Astrid M Moerman, Peter C Burgers, Heleen M M Van Beusekom, Theo M Luider, Hence J M Verhagen, Antonius F W Van der Steen, Kim Van der Heiden, Gijs Van Soest

Abstract read
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Recent Analytical Methodologies in Lipid Analysis.International journal of molecular sciences · 2024
    Review
  6. Article
  7. Article
  8. Pathophysiology of Atherosclerosis.International journal of molecular sciences · 2022
    Review
  9. MALDI MSI for a fresh view on atherosclerotic plaque lipids.Pflugers Archiv : European journal of physiology · 2022
    Article
  10. Article
  11. Loss of OTUD6B Stimulates Angiogenesis and Promotes Diabetic Atherosclerosis.Diabetes, metabolic syndrome and obesity : targets and therapy · 2022
    Article
  12. De Novo Sphingolipid Biosynthesis in Atherosclerosis.Advances in experimental medicine and biology · 2022
    Article
  13. Review
  14. Article
  15. Article
  16. Atheroma-Specific Lipids inJournal of the American Society for Mass Spectrometry · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Mirjam VisscherDepartment of Biomedical Engineering, Thorax Center, Erasmus MC, Rotterdam, The Netherlands. m.visscher@erasmusmc.nl.ORCID http://orcid.org/0000-0002-6867-7398
Astrid M MoermanDepartment of Biomedical Engineering, Thorax Center, Erasmus MC, Rotterdam, The Netherlands.
Peter C BurgersDepartment of Neurology, Laboratory of Neuro-Oncology, Erasmus MC, Rotterdam, The Netherlands.
Heleen M M Van BeusekomDepartment of Experimental Cardiology, Thorax Center, Erasmus MC, Rotterdam, The Netherlands.
Theo M LuiderDepartment of Neurology, Laboratory of Neuro-Oncology, Erasmus MC, Rotterdam, The Netherlands.
Hence J M VerhagenDepartment of Vascular and Endovascular Surgery, Erasmus Medical Center, Rotterdam, The Netherlands.
Antonius F W Van der SteenDepartment of Biomedical Engineering, Thorax Center, Erasmus MC, Rotterdam, The Netherlands.
Kim Van der HeidenDepartment of Biomedical Engineering, Thorax Center, Erasmus MC, Rotterdam, The Netherlands.
Gijs Van SoestDepartment of Biomedical Engineering, Thorax Center, Erasmus MC, Rotterdam, The Netherlands.

Funding

Hartstichting NHS2014T096Stichting voor de Technische Wetenschappen 1631ZonMw 91113020
6 · The paper itself

Abstract

Atherosclerosis is a lipid and inflammation-driven disease of the arteries that is characterized by gradual buildup of plaques in the vascular wall. A so-called vulnerable plaque, consisting of a lipid-rich necrotic core contained by a thin fibrous cap, may rupture and trigger thrombus formation, which can lead to ischemia in the heart (heart attack) or in the brain (stroke). In this study, we present a protocol to investigate the lipid composition of advanced human carotid plaques using matrix-assisted laser desorption ionization (MALDI) mass spectrometry imaging (MSI), providing a framework that should enable the discrimination of vulnerable from stable plaques based on lipid composition. We optimized the tissue preparation and imaging methods by systematically analyzing data from three specimens: two human carotid endarterectomy samples (advanced plaque) and one autopsy sample (early stage plaque). We show a robust data reduction method and evaluate the variability of the endarterectomy samples. We found diacylglycerols to be more abundant in a thrombotic area compared to other plaque areas and could distinguish advanced plaque from early stage plaque based on cholesteryl ester composition. We plan to use this systematic approach to analyze a larger dataset of carotid atherosclerotic plaques.

Indexed as

Carotid Artery DiseasesElectronic Data ProcessingEndarterectomy, CarotidHumansImage Processing, Computer-AssistedLipidsPlaque, AtheroscleroticReproducibility of ResultsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationThrombosisLipidsArtherosclerosisCarotid arteryEndarterectomyImagingLipidsMALDI-MSIMass spectrometryMethodPlaqueThrombusVulnerable plaque

Identifiers

PMID31250318
PMCPMC6695360

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.