Evidence map›Paper›PMID 31250317›Full record

ArticleJournal of the American Society for Mass Spectrometry2019

MeV-SIMS TOF Imaging of Organic Tissue with Continuous Primary Beam.

Boštjan Jenčič, Primož Vavpetič, Mitja Kelemen, Matjaž Vencelj, Katarina Vogel-Mikuš, Anja Kavčič, Primož Pelicon

Abstract read
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In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. The Static Limit in MeV Secondary Ion Mass Spectrometry.Journal of the American Society for Mass Spectrometry · 2025
    Article
  2. Gold-Assisted Molecular Imaging of Organic Tissue by MeV Secondary Ion Mass Spectrometry.Journal of the American Society for Mass Spectrometry · 2023
    Article
  3. Article
  4. Review
  5. Article
  6. ToF-SIMS Depth Profiling of Metal, Metal Oxide, and Alloy Multilayers in Atmospheres of HJournal of the American Society for Mass Spectrometry · 2022
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Boštjan JenčičJožef Stefan Institute, Jamova 39, SI-1000, Ljubljana, Slovenia.
Primož VavpetičJožef Stefan Institute, Jamova 39, SI-1000, Ljubljana, Slovenia.
Mitja KelemenJožef Stefan Institute, Jamova 39, SI-1000, Ljubljana, Slovenia.
Matjaž VenceljJožef Stefan Institute, Jamova 39, SI-1000, Ljubljana, Slovenia.
Katarina Vogel-MikušJožef Stefan Institute, Jamova 39, SI-1000, Ljubljana, Slovenia.
Anja KavčičBiotechnical Faculty, Department of Biology, University of Ljubljana, Večna pot 11, SI-1000, Ljubljana, Slovenia.
Primož PeliconJožef Stefan Institute, Jamova 39, SI-1000, Ljubljana, Slovenia. primoz.pelicon@ijs.si.ORCID http://orcid.org/0000-0003-2469-3342

Funding

Horizon 2020 824096Javna Agencija za Raziskovalno Dejavnost RS I0-0005Javna Agencija za Raziskovalno Dejavnost RS J7-9398Javna Agencija za Raziskovalno Dejavnost RS N1-0090Javna Agencija za Raziskovalno Dejavnost RS P1-0112Javna Agencija za Raziskovalno Dejavnost RS P1-0212
6 · The paper itself

Abstract

MeV-SIMS is an emerging mass spectrometry imaging method, which utilizes fast, heavy ions to desorb secondary molecules. High yields and low fragmentation rates of large molecules, associated with the electronic sputtering process, make it particularly useful in biomedical research, where insight into distribution of organic molecules is needed. Since the implementation of MeV-SIMS in to the micro-beam line at the tandem accelerator of Jožef Stefan Institute, MeV-SIMS provided some valuable observations on the distribution of biomolecules in plant tissue, as discussed by Jenčič et al. (Nucl. Inst. Methods Phys. Res. B. 371, 205-210, 2016; Nucl. Inst. Methods Phys. Res. B. 404, 140-145, 2017). However, limited focusing ability of the chlorine ion beam only allowed imaging at the tissue level. In order to surpass shortcomings of the existing method, we introduced a new approach, where we employ a continuous, low-current primary beam. In this mode, we bombard thin samples with a steady chlorine ion flux of approx. 5000 ions/s. After desorbing molecules, chlorine ions penetrate through the thinly cut sample and trigger the time-of-flight "start" signal on a continuous electron multiplier detector, positioned behind the sample. Such bombardment is more effective than previously used pulsing-beam mode, which demanded several orders of magnitude higher primary ion beam currents. Sub-micrometer focusing of low-current primary ion beam allows imaging of biological tissue on a subcellular scale. Simultaneously, new time-of-flight acquisition approach also improves mass resolution by a factor of 5. Within the article, we compare the performance of both methods and demonstrate the application of continuous mode on biological tissue. We also describe the thin sample preparation protocol, necessary for measurements with low primary ion currents.

Indexed as

Amino AcidsEquipment DesignHumansHydrogenImage Processing, Computer-AssistedLiverPoisson DistributionSeedsSpectrometry, Mass, Secondary IonZea maysAmino AcidsHydrogenElectronic sputteringImaging mass spectrometryMeV-SIMSMolecular imagingTime-of-flight

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.