ArticleScience advances2019
De novo assembly of the goldfish (
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Article in Science advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 106 papers.
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106citing papers in PubMed
–field-weighted citation impact
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
106 citing papers in PubMed.
- Prevalence of cyprinid herpesvirus-2 in goldfish aquarium shops in Tamil Nadu, India: a case report.In vitro cellular & developmental biology. Animal · 2026Article
- Bony fish genomes: Status and gaps.Journal of fish biology · 2026Review
- Evolutionary trajectories of teleost olfactory signaling genes shaped by long-term redundancy after whole-genome duplication.iScience · 2026Article
- A chromosome-level genome assembly of the scaly osman Diptychus maculatus.Scientific data · 2026Article
- Weak Phd2-Hif-1α Affinity Coupled with High Basal Expression Is Predicted to Enhance HIF Pathway Flexibility in Nile Tilapia (Animals : an open access journal from MDPI · 2026Article
- Multiple cis-regulatory elements collaborate to control mdka expression in telencephalic neural stem cells of adult zebrafish during constitutive and regenerative neurogenesis.The FEBS journal · 2026Article
- Mitochondrial responses to anoxia-reoxygenation exposure in crucian carp (Carassius carassius).The Journal of experimental biology · 2026Article
- Genomic consequences of domestication and the diversification of body coloration and morphology in ornamental medaka strains.Molecular biology and evolution · 2026Article
- The Fibrillar Collagens of Bony Fish: Genes, Proteins, and Biomedical Applications.Sub-cellular biochemistry · 2026Review
- Beyond the Beauty: Meristic and Genomic Signatures of Bangka's Endemic Betta Fishes.F1000Research · 2026Article
- Evolutionary diversification and immunoprofiling of cathepsin L toolkit in common carp.Frontiers in cellular and infection microbiology · 2026Article
- Mutated Hif-1αa Proteins with Increased Stability Under Normoxic Conditions Enhance Hypoxia Tolerance of Otomorphs by Promoting Glycolysis and Lactate Shuttle.Animals : an open access journal from MDPI · 2025Article
- Genome-Wide Protein Interaction Analysis in Parasitic Gyrodactylus Flatworms-Fish Hosts System and Drug Target Identification.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025Article
- Subgenome Partitioning and Polyploid Genome Evolution in the Loach Family Botiidae (Order Cypriniformes).Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025Article
- Article
- Stem and progenitor cell proliferation are independently regulated by cell type-specific cyclinD genes.Nature communications · 2025Article
- Expression pattern changes of three homeologs in chemokine activity enhance antiviral response to herpesvirus infection in a newly synthesized alloheptaploid.BMC genomics · 2025Article
- Convergent Evolution of Two Dopamine Receptor Genes: Repeated Evolution of Exon 6 Skipping in Drd2, and Repeated Deletion of Exon 6 in Drd3.Journal of molecular evolution · 2025Article
- Chromosome-level genome assembly of the doctor fish (Garra rufa).Scientific data · 2025Article
- Parallel Selection in Domesticated Atlantic Salmon from Divergent Founders Including on Whole-Genome Duplication-derived Homeologous Regions.Genome biology and evolution · 2025Article
46 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
16 authors.
Zelin ChenTranslational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.ORCID 0000-0002-8376-7367
Yoshihiro OmoriLaboratory for Molecular and Developmental Biology, Institute for Protein Research, Osaka University, Suita, Osaka, Japan.ORCID 0000-0002-1208-1237
Sergey KorenComputational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.ORCID 0000-0002-1472-8962
Takuya ShirokiyaYatomi Station, Aichi Fisheries Research Institute, Yatomi, Aichi, Japan.
Takuo KurodaYatomi Station, Aichi Fisheries Research Institute, Yatomi, Aichi, Japan.
Atsushi MiyamotoYatomi Station, Aichi Fisheries Research Institute, Yatomi, Aichi, Japan.
Hironori WadaLaboratory of Molecular and Developmental Biology, National Institute of Genetics, and Department of Genetics, SOKENDAI (The Graduate University for Advanced Studies), Mishima, Shizuoka, Japan.
Asao FujiyamaAdvanced Genomics Center, National Institute of Genetics, Mishima, Shizuoka, Japan.ORCID 0000-0002-8143-9300
Atsushi ToyodaAdvanced Genomics Center, National Institute of Genetics, Mishima, Shizuoka, Japan.ORCID 0000-0002-0728-7548
Suiyuan ZhangComputational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.ORCID 0000-0002-0443-387X
Tyra G WolfsbergComputational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.ORCID 0000-0001-5646-9455
Koichi KawakamiLaboratory of Molecular and Developmental Biology, National Institute of Genetics, and Department of Genetics, SOKENDAI (The Graduate University for Advanced Studies), Mishima, Shizuoka, Japan.
Adam M PhillippyComputational and Statistical Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.
NISC Comparative Sequencing Program
James C MullikinNIH Intramural Sequencing Center, National Human Genome Research Institute, Bethesda, MD, USA.ORCID 0000-0003-0825-3750
Shawn M BurgessTranslational and Functional Genomics Branch, National Human Genome Research Institute, Bethesda, MD, USA.ORCID 0000-0003-1147-0596
Funding
Inter- and Intra-Species Comparative SequencingZIBHG000196 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI THOMAS, JAMES · 2009 to 2025
$177.6MComparative Genomics Unit ResearchZIAHG200330 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI MULLIKIN, JAMES C · 2009 to 2022
$17.9MZebrafish targeted mutagenesis and functional genomicsZIAHG000183 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BURGESS, SHAWN M · 2009 to 2025
$16.7MSingle-molecule sequence assembly and analysisZIAHG200398 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI PHILLIPPY, ADAM · 2016 to 2025
$15.9MGENES EXPRESSED IN NEURONAL DEATHF31HG000183 · NHGRI · UNIVERSITY OF ROCHESTER · PI BURCH, ROBERT L · 1996 to 2000
$33kGENOMIC CHARACTERIZATION OF PARASITIC NEMATODESF32HG000196 · NHGRI · WASHINGTON UNIVERSITY · PI MCCARTER, JAMES P · 1998 to 1998
–Intramural NIH HHS ZIA HG000183Intramural NIH HHS ZIA HG200398Intramural NIH HHS ZIB HG000196NHGRI NIH HHS F31 HG000183NHGRI NIH HHS F32 HG000196NHGRI NIH HHS ZIA HG200398
Abstract
For over a thousand years, the common goldfish (
Indexed as
AnimalsAsiaCarpsEvolution, MolecularExonsGene DuplicationGenomeGenomicsGenotypeGoldfishPhenotypeZebrafish
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.