Evidence map›Paper›PMID 31249367›Full record

ArticleScientific reports2019

Enzyme activity and structural features of three single-domain phloem cyclophilins from Brassica napus.

Patrizia Hanhart, Sven Falke, Marcel Garbe, Victoria Rose, Melanie Thieß, Christian Betzel, Julia Kehr

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Patrizia HanhartUniversität Hamburg, Institute of Plant Science and Microbiology, Molecular Plant Genetics, Ohnhorststraße 18, 22609, Hamburg, Germany.
Sven FalkeUniversität Hamburg, Institute of Biochemistry and Molecular Biology, Laboratory for Structural Biology of Infection and Inflammation, c/o DESY, Notkestraße 85, 22603, Hamburg, Germany.
Marcel GarbeUniversität Hamburg, Institute of Plant Science and Microbiology, Molecular Plant Genetics, Ohnhorststraße 18, 22609, Hamburg, Germany.
Victoria RoseUniversität Hamburg, Institute of Plant Science and Microbiology, Molecular Plant Genetics, Ohnhorststraße 18, 22609, Hamburg, Germany.
Melanie ThießUniversität Hamburg, Institute of Plant Science and Microbiology, Molecular Plant Genetics, Ohnhorststraße 18, 22609, Hamburg, Germany.
Christian BetzelUniversität Hamburg, Institute of Biochemistry and Molecular Biology, Laboratory for Structural Biology of Infection and Inflammation, c/o DESY, Notkestraße 85, 22603, Hamburg, Germany.
Julia KehrUniversität Hamburg, Institute of Plant Science and Microbiology, Molecular Plant Genetics, Ohnhorststraße 18, 22609, Hamburg, Germany. julia.kehr@uni-hamburg.de.ORCID http://orcid.org/0000-0003-3617-9981
Universität Hamburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cyclophilins (CYPs) are a group of ubiquitous prolyl cis/trans isomerases (PPIases). It was shown that plants possess the most diverse CYP families and that these are abundant in the phloem long-distance translocation stream. Since phloem exudate showed PPIase activity, three single-domain CYPs that occur in phloem samples from Brassica napus were characterised on functional and structural levels. It could be shown that they exhibit isomerase activity and that this activity is controlled by a redox regulation mechanism, which has been postulated for divergent CYPs. The structure determination by small-angle X-ray scattering experiments revealed a conserved globular shape. In addition, the high-resolution crystal structure of BnCYP19-1 was resolved and refined to 2.0 Å resolution, and the active sites of related CYPs as well as substrate binding were modelled. The obtained data and results support the hypothesis that single domain phloem CYPs are active phloem PPIases that may function as chaperones.

Indexed as

Protein DomainsAmino Acid SequenceBinding SitesBrassica napusCatalytic DomainCyclophilinsEnzyme ActivationKineticsModels, MolecularOxidation-ReductionPhloemProtein ConformationStructure-Activity RelationshipCyclophilins

Identifiers

PMID31249367
PMCPMC6597583
OpenAlexW2954142698

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.