ArticleScientific reports2019
Deciphering the genetic basis of root morphology, nutrient uptake, yield, and yield-related traits in rice under dry direct-seeded cultivation systems.
Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.
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Who cites it
22 citing papers in PubMed.
- Natural genetic variations underlying iron and zinc uptake efficiency in rice under direct-seeded cultivation conditions.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- GWAS reveals genetic interplay between root architecture and nitrogen uptake in Aegilops tauschii.BMC plant biology · 2026Article
- Enhancing crop resilience through elite pre-breeding lines with key traits for dry direct-seeded rice.The plant genome · 2025Article
- Uncovering the Genomic Regions Associated with Yield Maintenance in Rice Under Drought Stress Using an Integrated Meta-Analysis Approach.Rice (New York, N.Y.) · 2024Article
- Mineral nutrients in plants under changing environments: A road to future food and nutrition security.The plant genome · 2023Review
- Article
- Genome-wide association studies in rice germplasm reveal significant genomic regions for root and yield-related traits under aerobic and irrigated conditions.Frontiers in plant science · 2023Article
- Breeding rice for a changing climate by improving adaptations to water saving technologies.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022Review
- Molecular basis of genetic plasticity to varying environmental conditions on growing rice by dry/direct-sowing and exposure to drought stress: Insights for DSR varietal development.Frontiers in plant science · 2022Article
- Proofing Direct-Seeded Rice with Better Root Plasticity and Architecture.International journal of molecular sciences · 2021Review
- Effects of small ridge and furrow mulching degradable film on dry direct seeded rice.Scientific reports · 2021Article
- Meta-QTL Analysis in Rice and Cross-Genome Talk of the Genomic Regions Controlling Nitrogen Use Efficiency in Cereal Crops Revealing Phylogenetic Relationship.Frontiers in genetics · 2021Article
- Developing Climate-Resilient, Direct-Seeded, Adapted Multiple-Stress-Tolerant Rice Applying Genomics-Assisted Breeding.Frontiers in plant science · 2021Article
- Genetic Dissection Uncovers Genome-Wide Marker-Trait Associations for Plant Growth, Yield, and Yield-Related Traits Under Varying Nitrogen Levels in Nested Synthetic Wheat Introgression Libraries.Frontiers in plant science · 2021Article
- Identification of High Nitrogen Use Efficiency Phenotype in Rice (Frontiers in plant science · 2021Article
- Mapping QTL hotspots associated with weed competitive traits in backcross population derived from Oryza sativa L. and O. glaberrima Steud.Scientific reports · 2020Article
- Genome-wide association study for phosphate deficiency responsive root hair elongation in chickpea.Functional & integrative genomics · 2020Article
- More and more of less and less: Is genomics-based breeding of dry direct-seeded rice (DDSR) varieties the need of hour?Plant biotechnology journal · 2020Review
- Phenotyping Root Systems in a Set of Japonica Rice Accessions: Can Structural Traits Predict the Response to Drought?Rice (New York, N.Y.) · 2020Article
- Genome-Wide Association Study for Yield and Yield Related Traits under Reproductive Stage Drought in a Diverse indica-aus Rice Panel.Rice (New York, N.Y.) · 2020Article
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Authors and funding
11 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
In the face of global water scarcity, a successful transition of rice cultivation from puddled to dry direct-seeded rice (DDSR) is a future need. A genome-wide association study was performed on a complex mapping population for 39 traits: 9 seedling-establishment traits, 14 root and nutrient-uptake traits, 5 plant morphological traits, 4 lodging resistance traits, and 7 yield and yield-contributing traits. A total of 10 significant marker-trait associations (MTAs) were found along with 25 QTLs associated with 25 traits. The percent phenotypic variance explained by SNPs ranged from 8% to 84%. Grain yield was found to be significantly and positively correlated with seedling-establishment traits, root morphological traits, nutrient uptake-related traits, and grain yield-contributing traits. The genomic colocation of different root morphological traits, nutrient uptake-related traits, and grain-yield-contributing traits further supports the role of root morphological traits in improving nutrient uptake and grain yield under DDSR. The QTLs/candidate genes underlying the significant MTAs were identified. The identified promising progenies carrying these QTLs may serve as potential donors to be exploited in genomics-assisted breeding programs for improving grain yield and adaptability under DDSR.
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